DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and LOC100536312

DIOPT Version :10

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_068076096.1 Gene:LOC100536312 / 100536312 -ID:- Length:420 Species:Danio rerio


Alignment Length:168 Identity:62/168 - (36%)
Similarity:83/168 - (49%) Gaps:31/168 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 NASKRGKPKRVPG--PYRCKLCTQSFTQKQNLEIHMRIHTGERPYKCSLCPRSFAQK-------- 255
            |.|..|:|::...  .:.||.|..||:||..|::|||:||.|:||.|..|.:||.||        
Zfish    66 NTSSHGRPRKSKSGCNFSCKQCRNSFSQKSKLDVHMRVHTREQPYTCEQCGKSFGQKQGFKAHMK 130

  Fly   256 --------------------GNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFK 300
                                ||..:|.|.||||:||.|..|.|.|.....|.||.|.||||:|:.
Zfish   131 IHTGERKFTCQECEKSFYHSGNFAAHMRIHTGEKPFSCKQCGKSFCHKPNLDVHMRVHTGEKPYT 195

  Fly   301 CSKCQQSFKQLNGLQKHMSAHTRGKRRTSSQETKRNKF 338
            |.:|.:||.|......||..|| |||..:.|:..::.:
Zfish   196 CEQCGKSFGQKQSFNTHMRIHT-GKRPCTCQQCGKSYY 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:462262
SFP1 <131..317 CDD:227516 54/145 (37%)
C2H2 Zn finger 217..237 CDD:275368 11/19 (58%)
zf-H2C2_2 229..254 CDD:463886 13/24 (54%)
C2H2 Zn finger 245..265 CDD:275368 10/47 (21%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
LOC100536312XP_068076096.1 C2H2 Zn finger 84..104 CDD:275368 11/19 (58%)
C2H2 Zn finger 112..132 CDD:275368 6/19 (32%)
COG5048 <137..292 CDD:227381 36/97 (37%)
C2H2 Zn finger 140..160 CDD:275368 4/19 (21%)
C2H2 Zn finger 168..188 CDD:275368 8/19 (42%)
C2H2 Zn finger 196..216 CDD:275368 7/19 (37%)
C2H2 Zn finger 224..244 CDD:275368 1/9 (11%)
COG5048 <249..397 CDD:227381
C2H2 Zn finger 252..272 CDD:275368
C2H2 Zn finger 280..300 CDD:275368
C2H2 Zn finger 308..328 CDD:275368
C2H2 Zn finger 336..356 CDD:275368
C2H2 Zn finger 364..384 CDD:275368
C2H2 Zn finger 392..412 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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