DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and LOC100535113

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_003198560.1 Gene:LOC100535113 / 100535113 -ID:- Length:331 Species:Danio rerio


Alignment Length:190 Identity:62/190 - (32%)
Similarity:86/190 - (45%) Gaps:39/190 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 DNDSWSPDSELEHEDDDKIW---------NASKRGKPKRVPGP--YRCKLCTQSFTQKQNLEIHM 234
            :...|:...|.:.|...:|.         ..|..|.|::....  :.|..|...||:|.||::||
Zfish     5 EETQWNKTEEKQFEKHQEITTDEKPTLTEKTSSSGGPRKSKSACNFTCVQCGNCFTRKHNLQVHM 69

  Fly   235 RIHTGERPYKCSLCPRSFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTRTHTG---- 295
            |:||||:||.|..|.:||.|.|.|:.|.|.|||||.:.|..|.:||...|....|.|.|||    
Zfish    70 RVHTGEKPYSCPQCGKSFKQNGYLKVHMRTHTGERCYTCQQCGQRFYTTGNFAQHMRIHTGERPY 134

  Fly   296 ------------------------EQPFKCSKCQQSFKQLNGLQKHMSAHTRGKRRTSSQ 331
                                    |:|:.|.:|.:||||.:.|:.|:.||..|:..|..|
Zfish   135 ICLQCGKSLYQSANLAAHMRIHTVEKPYSCIQCGKSFKQNSSLEAHIRAHDDGRIFTCPQ 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071
zf-C2H2 215..237 CDD:278523 10/21 (48%)
C2H2 Zn finger 217..237 CDD:275368 10/19 (53%)
zf-H2C2_2 229..254 CDD:290200 15/24 (63%)
C2H2 Zn finger 245..265 CDD:275368 9/19 (47%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
zf-H2C2_2 286..310 CDD:290200 11/51 (22%)
C2H2 Zn finger 301..321 CDD:275368 8/19 (42%)
LOC100535113XP_003198560.1 COG5048 <50..232 CDD:227381 55/145 (38%)
C2H2 Zn finger 52..72 CDD:275368 10/19 (53%)
zf-H2C2_2 64..89 CDD:290200 15/24 (63%)
C2H2 Zn finger 80..100 CDD:275368 9/19 (47%)
C2H2 Zn finger 108..128 CDD:275368 7/19 (37%)
C2H2 Zn finger 136..156 CDD:275368 0/19 (0%)
zf-H2C2_2 148..173 CDD:290200 6/24 (25%)
COG5048 <160..297 CDD:227381 14/35 (40%)
C2H2 Zn finger 164..184 CDD:275368 8/19 (42%)
C2H2 Zn finger 192..212 CDD:275368 1/3 (33%)
zf-H2C2_2 204..227 CDD:290200
C2H2 Zn finger 220..240 CDD:275368
zf-H2C2_2 233..257 CDD:290200
C2H2 Zn finger 248..268 CDD:275368
C2H2 Zn finger 276..296 CDD:275368
C2H2 Zn finger 303..323 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588269
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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