DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17359 and si:dkey-262g12.3

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_009299305.1 Gene:si:dkey-262g12.3 / 100534843 ZFINID:ZDB-GENE-060503-255 Length:389 Species:Danio rerio


Alignment Length:370 Identity:101/370 - (27%)
Similarity:147/370 - (39%) Gaps:95/370 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DESDCLLDIYTEPYASSNRVQEQEPVLATMLR--ECSGCSVHKED----GMPQFICVECAEAVRN 70
            |.....|.:..|.....|.::|::..|.|:.:  :....|.||.|    ....|.|.:|.:....
Zfish    23 DPGQTELTMLKEETQELNEMEEKDQDLKTVEKSTKIKRTSPHKRDQETKSTGNFTCSQCGKCFAQ 87

  Fly    71 AYRLR--------------RQCRKSHQYFEQLRLMMKELDDIEYCLNIGDNIEPQMPVSVMEAGK 121
            .:.||              .:|.||.:..:.|.:.|:        ::.|:.     |.|..:.||
Zfish    88 KHNLRVHMSAHTREKPHLCPECGKSFRRKQYLAVHMR--------IHTGEK-----PFSCDQCGK 139

  Fly   122 TPETS-------------EPLLVELVQVKYMPPEPKPISSPLPDNNEHKLAQSYSPAKTPHNKSK 173
            :...|             :|.......|:|:                ||  |........||:.|
Zfish   140 SFRQSIILRHHIRLHTGEKPYACPQCGVRYI----------------HK--QRLEKHMAVHNEDK 186

  Fly   174 -----RRARSYSDNDSWSPDSELEHEDDDKIWNASKRGKPKRVPGPYRCKLCTQSFTQKQNLEIH 233
                 :..:|::.|        |..:...||....|         |:.|:.|.:||..||.:|:|
Zfish   187 PFVCPQCGKSFTLN--------LNLKQHMKIHTGEK---------PFVCQQCGKSFNHKQQVEVH 234

  Fly   234 MRIHTGERPYKCSLCPRSFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQP 298
            ||:|||||||.||.|.:||.|||||..|.|.|..|||:.|..|.:.......|..|.||||.::|
Zfish   235 MRVHTGERPYICSQCGKSFTQKGNLDHHMRTHARERPYTCTKCGRNLTSQSSLDAHMRTHTEKKP 299

  Fly   299 FKCSKCQQSFKQLNGLQKHMSAHTR---------GKRRTSSQETK 334
            :.||:|.|||.:.:.|:.|..|||.         ||..||....|
Zfish   300 YACSECGQSFAKRSVLKVHRRAHTGEQTYTCTRCGKNYTSKTYLK 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071 19/95 (20%)
zf-C2H2 215..237 CDD:278523 10/21 (48%)
C2H2 Zn finger 217..237 CDD:275368 10/19 (53%)
zf-H2C2_2 229..254 CDD:290200 16/24 (67%)
C2H2 Zn finger 245..265 CDD:275368 12/19 (63%)
zf-H2C2_2 257..282 CDD:290200 10/24 (42%)
C2H2 Zn finger 273..293 CDD:275368 5/19 (26%)
zf-H2C2_2 286..310 CDD:290200 13/23 (57%)
C2H2 Zn finger 301..321 CDD:275368 8/19 (42%)
si:dkey-262g12.3XP_009299305.1 COG5048 <54..225 CDD:227381 38/218 (17%)
C2H2 Zn finger 78..98 CDD:275368 4/19 (21%)
C2H2 Zn finger 106..126 CDD:275368 5/27 (19%)
C2H2 Zn finger 134..154 CDD:275368 3/19 (16%)
C2H2 Zn finger 162..182 CDD:275368 5/37 (14%)
C2H2 Zn finger 190..210 CDD:275368 4/27 (15%)
C2H2 Zn finger 218..238 CDD:275368 10/19 (53%)
SFP1 <235..323 CDD:227516 43/87 (49%)
C2H2 Zn finger 246..266 CDD:275368 12/19 (63%)
C2H2 Zn finger 274..294 CDD:275368 5/19 (26%)
C2H2 Zn finger 302..322 CDD:275368 8/19 (42%)
C2H2 Zn finger 330..350 CDD:275368 5/15 (33%)
zf-H2C2_2 342..367 CDD:316026 1/3 (33%)
C2H2 Zn finger 358..378 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588353
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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