DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and si:ch73-266f23.3

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001314962.1 Gene:si:ch73-266f23.3 / 100333922 ZFINID:ZDB-GENE-110914-182 Length:300 Species:Danio rerio


Alignment Length:232 Identity:79/232 - (34%)
Similarity:110/232 - (47%) Gaps:35/232 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 SVMEAGKTP----------------ETSEPLLV-ELVQVKYMPPEPKPISSPLPDNNE-HKLAQS 161
            ||....|||                |.||.|:: |...||...||...:.....:..| :::.:.
Zfish     9 SVQTQRKTPAEATDLHTVIKMAFIKEESEDLMIEETFAVKQEDPEQTELMGLKEETQEPNEMEEK 73

  Fly   162 YSPAKTPHNKSKRRARSYSDNDSWSPDSELEHEDDDKIWNASKRGKPKRVPGPYRCKLCTQSFTQ 226
            ....|......::..:.:|            ::.:.|:......||     .|:||..|.:||:|
Zfish    74 DQFEKRQDYMCRQCGKGFS------------YKQNLKVHLGIHSGK-----RPFRCGQCGKSFSQ 121

  Fly   227 KQNLEIHMRIHTGERPYKCSLCPRSFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTR 291
            ||.||.|||:||.||||.|:.|.:||..|.:||.|.|.||||||:.|..|.|||.|:..|:.|..
Zfish   122 KQALEGHMRVHTRERPYSCTQCGKSFTHKHHLQHHIRIHTGERPYACTQCGKRFNQLQVLKNHLT 186

  Fly   292 THTGEQPFKCSKCQQSFKQLNGLQKHMSAHTRGKRRT 328
            .||..:|..|::|.:||...|.|:.||..|||.|..|
Zfish   187 IHTKVKPHACTQCGKSFSLKNRLEMHMRVHTREKTST 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071
zf-C2H2 215..237 CDD:278523 13/21 (62%)
C2H2 Zn finger 217..237 CDD:275368 12/19 (63%)
zf-H2C2_2 229..254 CDD:290200 15/24 (63%)
C2H2 Zn finger 245..265 CDD:275368 9/19 (47%)
zf-H2C2_2 257..282 CDD:290200 15/24 (63%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..310 CDD:290200 9/23 (39%)
C2H2 Zn finger 301..321 CDD:275368 8/19 (42%)
si:ch73-266f23.3NP_001314962.1 C2H2 Zn finger 84..104 CDD:275368 2/31 (6%)
zf-H2C2_2 96..121 CDD:290200 9/29 (31%)
COG5048 <109..275 CDD:227381 59/115 (51%)
C2H2 Zn finger 112..132 CDD:275368 12/19 (63%)
zf-H2C2_2 124..149 CDD:290200 15/24 (63%)
zf-C2H2 138..160 CDD:278523 10/21 (48%)
C2H2 Zn finger 140..160 CDD:275368 9/19 (47%)
zf-H2C2_2 152..177 CDD:290200 15/24 (63%)
C2H2 Zn finger 168..188 CDD:275368 8/19 (42%)
C2H2 Zn finger 196..216 CDD:275368 8/19 (42%)
zf-C2H2 223..244 CDD:278523 1/1 (100%)
C2H2 Zn finger 224..244 CDD:275368 79/232 (34%)
C2H2 Zn finger 252..272 CDD:275368
C2H2 Zn finger 280..300 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588315
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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