DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17359 and zgc:174646

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001116087.1 Gene:zgc:174646 / 100142637 ZFINID:ZDB-GENE-080305-6 Length:408 Species:Danio rerio


Alignment Length:328 Identity:87/328 - (26%)
Similarity:133/328 - (40%) Gaps:93/328 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RDESDCLLDIYTEPYASSNRVQ-------EQEPVLATMLRECSGCSVHKEDGMPQFICVECAEAV 68
            ::::|.:.| |.|.....:||:       |...:|.|..:.|             |.|.:|.:::
Zfish    25 QEQTDLIKD-YEESKEEEHRVKIEGKTHLETGGILKTRDKSC-------------FTCTQCGKSL 75

  Fly    69 RNAYRLRRQCRKSHQYFEQLRLMMKELDDIEYCLNIGDNIEPQMPVSVMEAGKTPETSEPLLVEL 133
            .|         ||     :|::.||        ::.|:.     |.:..:.||:...|..|    
Zfish    76 AN---------KS-----KLKIHMK--------IHTGEK-----PFTCTQCGKSFSHSANL---- 109

  Fly   134 VQVKYMPPEPKPISSPLPDNNEHKLAQSYSPAKTPHNKSKRRARSYSDNDSWSPDSELEHEDDDK 198
                                |:|.:..:.....|.|...|    |:|     .|.:...|.   :
Zfish   110 --------------------NQHMMIHTGGKPFTCHQCGK----SFS-----KPSTLYRHM---R 142

  Fly   199 IWNASKRGKPKRVPGPYRCKLCTQSFTQKQNLEIHMRIHTGERPYKCSLCPRSFAQKGNLQSHTR 263
            |....:         |:.|..|.:||.|..||.:||||||||:|:.|:.|.::|....:|..|..
Zfish   143 IHTGEQ---------PFTCTQCGKSFNQPSNLNLHMRIHTGEKPFTCTQCGKNFIHSSHLNEHMM 198

  Fly   264 CHTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSKCQQSFKQLNGLQKHMSAHTRGKRRT 328
            .||||:||.|..|.:.|.....|..|.|.||||:||.|::|.:||.|...|.:||..||.....|
Zfish   199 IHTGEKPFTCTQCGRSFSLSSTLNRHMRIHTGEKPFTCTQCGKSFSQSASLNRHMRIHTGESPFT 263

  Fly   329 SSQ 331
            .:|
Zfish   264 CTQ 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071 16/83 (19%)
zf-C2H2 215..237 CDD:278523 10/21 (48%)
C2H2 Zn finger 217..237 CDD:275368 10/19 (53%)
zf-H2C2_2 229..254 CDD:290200 14/24 (58%)
C2H2 Zn finger 245..265 CDD:275368 5/19 (26%)
zf-H2C2_2 257..282 CDD:290200 11/24 (46%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
zf-H2C2_2 286..310 CDD:290200 13/23 (57%)
C2H2 Zn finger 301..321 CDD:275368 8/19 (42%)
zgc:174646NP_001116087.1 C2H2 Zn finger 68..88 CDD:275368 8/41 (20%)
zf-H2C2_2 81..105 CDD:290200 7/36 (19%)
C2H2 Zn finger 96..116 CDD:275368 6/43 (14%)
zf-H2C2_2 108..132 CDD:290200 7/51 (14%)
C2H2 Zn finger 124..144 CDD:275368 6/31 (19%)
COG5048 <129..391 CDD:227381 58/159 (36%)
zf-H2C2_2 137..161 CDD:290200 7/35 (20%)
C2H2 Zn finger 152..172 CDD:275368 10/19 (53%)
zf-H2C2_2 164..187 CDD:290200 13/22 (59%)
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
zf-H2C2_2 192..216 CDD:290200 10/23 (43%)
C2H2 Zn finger 208..228 CDD:275368 6/19 (32%)
zf-H2C2_2 221..245 CDD:290200 13/23 (57%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
zf-H2C2_2 248..272 CDD:290200 7/19 (37%)
C2H2 Zn finger 264..284 CDD:275368 1/3 (33%)
zf-H2C2_2 276..301 CDD:290200
C2H2 Zn finger 292..312 CDD:275368
C2H2 Zn finger 320..340 CDD:275368
zf-H2C2_2 332..356 CDD:290200
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 375..395 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.