DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and si:ch211-161m3.6

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001314790.1 Gene:si:ch211-161m3.6 / 100005838 ZFINID:ZDB-GENE-161017-36 Length:295 Species:Danio rerio


Alignment Length:263 Identity:84/263 - (31%)
Similarity:121/263 - (46%) Gaps:53/263 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LRLMMKELDDIE----YCLNIGDNIEPQMPVSVMEAGKTPETSEPLLVELVQVKYMPPEPKPISS 148
            :..:.:|.:||:    :.:.:.|..|...|:.|.|..:          ||.:|:    |..|.  
Zfish     1 MAFIKEECEDIKTEDVFIVKMEDAEEHTDPLPVKEESQ----------ELDEVE----EKGPF-- 49

  Fly   149 PLPDNNEHKL--AQSYSPAKTPHNKSKRRARSYSDNDSWSPDSELEHEDDDKIWNASKRGKPKRV 211
               :|.:|.:  .||:..|:|               |..|...:::..|....:...:.||....
Zfish    50 ---ENYQHFVTGGQSFHRART---------------DRTSSQEKVQEIDPISYFICFQCGKGFTQ 96

  Fly   212 PG-------------PYRCKLCTQSFTQKQNLEIHMRIHTGERPYKCSLCPRSFAQKGNLQSHTR 263
            .|             ||.|.||.:||.|..|||:||.:|:||.|:.|..|.:||::||||:.|.|
Zfish    97 KGSLNRHMRTHTGEKPYSCPLCGKSFNQHGNLEVHMGVHSGETPFACQQCGKSFSRKGNLRYHMR 161

  Fly   264 CHTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSKCQQSFKQLNGLQKHMSAHTRGKRRT 328
            .||||.||.|..|...|...|.|..|.|.||||:|:.||:|.:||:|...|:.||..||..|..|
Zfish   162 VHTGECPFTCQQCGISFTAKGSLTRHMRIHTGERPYTCSECGESFEQHGSLKVHMRTHTGEKPYT 226

  Fly   329 SSQ 331
            ..|
Zfish   227 CQQ 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071 84/263 (32%)
zf-C2H2 215..237 CDD:278523 12/21 (57%)
C2H2 Zn finger 217..237 CDD:275368 11/19 (58%)
zf-H2C2_2 229..254 CDD:290200 13/24 (54%)
C2H2 Zn finger 245..265 CDD:275368 10/19 (53%)
zf-H2C2_2 257..282 CDD:290200 13/24 (54%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
zf-H2C2_2 286..310 CDD:290200 13/23 (57%)
C2H2 Zn finger 301..321 CDD:275368 9/19 (47%)
si:ch211-161m3.6NP_001314790.1 COG5048 <65..234 CDD:227381 67/180 (37%)
zf-C2H2 85..107 CDD:278523 3/21 (14%)
C2H2 Zn finger 87..107 CDD:275368 3/19 (16%)
zf-H2C2_2 99..124 CDD:290200 7/24 (29%)
C2H2 Zn finger 115..135 CDD:275368 11/19 (58%)
zf-H2C2_2 127..152 CDD:290200 13/24 (54%)
C2H2 Zn finger 143..163 CDD:275368 10/19 (53%)
zf-H2C2_2 155..179 CDD:290200 12/23 (52%)
C2H2 Zn finger 171..191 CDD:275368 7/19 (37%)
zf-H2C2_2 183..208 CDD:290200 13/24 (54%)
C2H2 Zn finger 199..219 CDD:275368 9/19 (47%)
zf-H2C2_2 211..236 CDD:290200 8/19 (42%)
C2H2 Zn finger 227..247 CDD:275368 1/3 (33%)
zf-H2C2_2 239..264 CDD:290200
C2H2 Zn finger 255..271 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588363
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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