DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17361 and kipf

DIOPT Version :10

Sequence 1:NP_648678.3 Gene:CG17361 / 39548 FlyBaseID:FBgn0036395 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_649750.1 Gene:kipf / 40937 FlyBaseID:FBgn0014931 Length:434 Species:Drosophila melanogaster


Alignment Length:226 Identity:55/226 - (24%)
Similarity:88/226 - (38%) Gaps:65/226 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 MDELVKMCRVCMDEPKDLLDIYDNKSLGDRLSDDLQRTKEPEPTPADLLNICSAYPVDTGDGFPL 89
            |.....:||.||||...|:||:.|  :.|.:.|      |||.:.:.:|..|:..||..||..|.
  Fly     2 MHSAKNVCRTCMDETGTLVDIFAN--VRDPVLD------EPEMSLSHILARCTERPVKRGDLLPQ 58

  Fly    90 KICEPCLIKLREALRFRRRYTRTMEYVARVKREQSDKETCDLLEAEDWDFTD------RIKSEEE 148
            .||..|::.::.|.||:.:..::.::..||..:....|....|.|.:.|...      ::||:.:
  Fly    59 FICVSCVLAVQNAFRFKWQSEQSYQHFFRVLNQSGAPENQVHLAACNGDKNQIINQKMQLKSDRQ 123

  Fly   149 E--------EEDDGDRNDKQ------------------------------------PKKETRNE- 168
            :        ::.|.|.:.||                                    ||:.||:. 
  Fly   124 QDTQQMTKTQKPDDDLSQKQTLQAKLQEGNIDGPPESFTLHPRKRTCRTEEQADMIPKEATRSTK 188

  Fly   169 --VDKRRPFKCTDCQKSFTGKAQLTMHRRTH 197
              .|....:.|..|.|.|..:.||    |||
  Fly   189 MICDADGYYNCPHCSKRFCSQTQL----RTH 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17361NP_648678.3 zf-AD 31..115 CDD:462262 28/83 (34%)
zf-C2H2 175..197 CDD:395048 7/21 (33%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
kipfNP_649750.1 zf-AD 8..75 CDD:462262 27/74 (36%)
COG5048 220..>284 CDD:227381
C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
C2H2 Zn finger 350..370 CDD:275368
C2H2 Zn finger 379..399 CDD:275368
C2H2 Zn finger 406..427 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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