DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17361 and CG44002

DIOPT Version :10

Sequence 1:NP_648678.3 Gene:CG17361 / 39548 FlyBaseID:FBgn0036395 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_608754.1 Gene:CG44002 / 33535 FlyBaseID:FBgn0264744 Length:345 Species:Drosophila melanogaster


Alignment Length:196 Identity:46/196 - (23%)
Similarity:83/196 - (42%) Gaps:33/196 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 CRVCMDEPKDLLDIYDNKSLGDRLSDDLQRTKEPEPTPADLLNI---CSAYPVDTGDGFPLKICE 93
            ||||:...|::::|::                |.:..|..:.::   |:.:.|:.||..|..||.
  Fly     5 CRVCLASSKNMVNIFE----------------ERQDLPVSIAHMIIECTGFKVEKGDSLPHSICP 53

  Fly    94 PCLIKLREALRFRRRYTRTMEYVARVKREQSDKETCD--LLEAEDWDFTDRIKSEEEE---EEDD 153
            ||:.....|....:.|.|:.:....|:....::|..:  ::|..|.|....|..:||:   .|:.
  Fly    54 PCVKDAHNAFTIIKTYERSYQVFYEVQDTVLEEELSEDVIIELSDSDEVILIDEQEEKVHLSENK 118

  Fly   154 GDRNDKQPKKETR----NEVDKRRPFKCTDCQKSFTGKAQLTMH-RRTHTKGSTR----TRRKAL 209
            ...|:...::|::    :.|.:.:...||.|..||.....|.:| .|.||....|    |...|:
  Fly   119 APTNEVSTQEESKTAQSDNVSEDKGHICTQCHMSFRRPGLLELHILRHHTTDGPRPMSSTSEHAV 183

  Fly   210 K 210
            |
  Fly   184 K 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17361NP_648678.3 zf-AD 31..115 CDD:462262 20/85 (24%)
zf-C2H2 175..197 CDD:395048 8/22 (36%)
C2H2 Zn finger 177..197 CDD:275368 8/20 (40%)
CG44002NP_608754.1 zf-AD 4..74 CDD:462262 20/84 (24%)
C2H2 Zn finger 146..166 CDD:275368 7/19 (37%)
COG5048 <162..302 CDD:227381 8/23 (35%)
C2H2 Zn finger 202..222 CDD:275368
C2H2 Zn finger 230..250 CDD:275368
C2H2 Zn finger 258..278 CDD:275368
SUF4-like 282..>342 CDD:411020
C2H2 Zn finger 286..311 CDD:411020
C2H2 Zn finger 286..306 CDD:275368
C2H2 Zn finger 314..335 CDD:411020
C2H2 Zn finger 314..333 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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