DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17361 and CG2202

DIOPT Version :10

Sequence 1:NP_648678.3 Gene:CG17361 / 39548 FlyBaseID:FBgn0036395 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_572657.2 Gene:CG2202 / 32014 FlyBaseID:FBgn0030240 Length:889 Species:Drosophila melanogaster


Alignment Length:185 Identity:49/185 - (26%)
Similarity:72/185 - (38%) Gaps:32/185 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KMCRVCMDEPKDLLDIYDNKSLGDRLSDDLQRTK-EPEPTPADLLNICSAYPVDTGDGFPLKICE 93
            ::||||:   ||:       ||...|......|. |.:...|.:|:.|:.:..:..||.|..:|.
  Fly    44 RVCRVCL---KDV-------SLEGELHFIFNETPVEQDANLARILDECTLHQCERNDGMPPHMCS 98

  Fly    94 PCLIKLREALRFRRRYTRT-MEYVARVKREQSDKETCDLLEAEDWDFTDRIKSEEEEEEDDGDRN 157
            .|:...|.|.||:|...|: ...||.:.|....|..    .||....||::.....|...|...|
  Fly    99 SCVEAARNAYRFKRHAERSYCSLVALLGRSPQLKAR----GAEAASQTDQVALLPCEMCHDQFLN 159

  Fly   158 DKQPKKETRNEVDK--------------RRPFKCTDCQKSFTGKAQLTMH-RRTH 197
            ..:.:.. ||:|.:              ...|||..|.:.|....||..| .|:|
  Fly   160 SLELRLH-RNQVHRTTKEATSAGTDGLPSEDFKCKFCPQHFPHLRQLRSHLARSH 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17361NP_648678.3 zf-AD 31..115 CDD:462262 25/85 (29%)
zf-C2H2 175..197 CDD:395048 9/22 (41%)
C2H2 Zn finger 177..197 CDD:275368 7/20 (35%)
CG2202NP_572657.2 zf-AD 45..121 CDD:214871 25/85 (29%)
C2H2 Zn finger 150..171 CDD:275368 5/21 (24%)
C2H2 Zn finger 192..213 CDD:275370 7/20 (35%)
C2H2 Zn finger 221..239 CDD:275370
COG5048 <443..730 CDD:227381
C2H2 Zn finger 476..496 CDD:275368
C2H2 Zn finger 504..525 CDD:275368
C2H2 Zn finger 532..548 CDD:275368
C2H2 Zn finger 573..593 CDD:275368
C2H2 Zn finger 600..620 CDD:275368
C2H2 Zn finger 628..648 CDD:275368
C2H2 Zn finger 656..676 CDD:275368
C2H2 Zn finger 684..704 CDD:275368
C2H2 Zn finger 712..732 CDD:275368
C2H2 Zn finger 739..755 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.