DRSC/TRiP Functional Genomics Resources

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Protein Alignment 26-29-p and RD19

DIOPT Version :9

Sequence 1:NP_620470.1 Gene:26-29-p / 39547 FlyBaseID:FBgn0250848 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_568052.1 Gene:RD19 / 830064 AraportID:AT4G39090 Length:368 Species:Arabidopsis thaliana


Alignment Length:340 Identity:121/340 - (35%)
Similarity:178/340 - (52%) Gaps:35/340 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 MQEFISGTDEHV---DKAFHHFKRKHGVAYHSDTEHEHRKNIFRQNLRYIHSKNRAKLTYTLAVN 291
            :::.:.|.:..|   :..|..||||.|..|.|:.||::|.::|:.|||......:...:.|..|.
plant    33 IRQVVGGAEPQVLTSEDHFSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVT 97

  Fly   292 HLADKTEEELKARRGYKSSGIYNTGKPFPYDVPKY----KDEIPDQYDWRLYGAVTPVKDQSVCG 352
            ..:|.|..|.:.    |..|: .:|...|.|..|.    .:.:|:.:|||.:|||||||:|..||
plant    98 QFSDLTRSEFRK----KHLGV-RSGFKLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCG 157

  Fly   353 SCWSFGTIGHLEGAFFLKNGGNLVRLSQQALIDCSWAYG-------NNGCDGGEDFRVYQWMLQS 410
            |||||...|.||||.||.. |.||.||:|.|:||.....       ::||:||.....:::.|::
plant   158 SCWSFSATGALEGANFLAT-GKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKT 221

  Fly   411 GGVPTEEEYGPYLGQDG-YCHVNNVTLVAPIKGFVNVTSNDPNAFKLALLKHGPLSVAIDASPKT 474
            ||:..||:| ||.|:|| .|.::...:||.:..| :|.|.|.......|:|:|||:|||:|.  .
plant   222 GGLMKEEDY-PYTGKDGKTCKLDKSKIVASVSNF-SVISIDEEQIAANLVKNGPLAVAINAG--Y 282

  Fly   475 FSFYSHGVYYEPTCKNDVDGLDHAVLAVGYGS-------INGEDYWLVKNSWSTYWGNDGYILMS 532
            ...|..||.....|..   .|:|.||.||||:       ...:.||::||||...||.:|:..:.
plant   283 MQTYIGGVSCPYICTR---RLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKIC 344

  Fly   533 AKKNNCGVMTMPTYV 547
            ..:|.|||.:|.:.|
plant   345 KGRNICGVDSMVSTV 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
26-29-pNP_620470.1 Inhibitor_I29 245..300 CDD:214853 19/54 (35%)
Peptidase_C1A 331..547 CDD:239068 92/230 (40%)
RD19NP_568052.1 Inhibitor_I29 51..106 CDD:214853 19/54 (35%)
Peptidase_C1 135..359 CDD:395062 92/231 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53545
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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