DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 26-29-p and ctsc

DIOPT Version :9

Sequence 1:NP_620470.1 Gene:26-29-p / 39547 FlyBaseID:FBgn0250848 Length:549 Species:Drosophila melanogaster
Sequence 2:XP_012812143.2 Gene:ctsc / 407938 XenbaseID:XB-GENE-940480 Length:458 Species:Xenopus tropicalis


Alignment Length:578 Identity:143/578 - (24%)
Similarity:218/578 - (37%) Gaps:164/578 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VFLALALLAGLAFS-ANATNPPKWDPNYIVKGTLYIPYAEIAEPFYAWYDKNTRRSRIDYYGGMV 66
            |||||....|.|.: ||.:.|.       ::||...   :|.|...|..||:...|::    |.|
 Frog     8 VFLALLCRLGAADTPANCSFPD-------LEGTWEF---QIGEGSGAARDKSIDCSQL----GKV 58

  Fly    67 KTYQLA-------GEGQYGTLLKLAPITTKTENNKLTCLQVNGTADQAVDIQSILPDAKPFSLVG 124
            :|....       .|.|||.|                    .|                 |:|:.
 Frog    59 RTKLTVTMKELYIAEDQYGNL--------------------GG-----------------FTLIY 86

  Fly   125 TESFLGYTCDKFRLESTIGQKKNIYTLWVRYKKSPHYPSSRMPIPVRYEMRGYNTLLGSHYDHYY 189
            .:.|               :.|.:..|:..:.|              ||.||.|.          
 Frog    87 NQGF---------------EVKILNYLFFGFFK--------------YEQRGSNV---------- 112

  Fly   190 LDYDSYEHDDIPNEVFEIDDSLQCVGFPGPGTGHYATFNPMQEFISGTDEHVDKAFHHFKRKHGV 254
               .||.|:..|..|.::      :|      .::|.|  :.:.|| .|..|......|.:|..:
 Frog   113 ---TSYCHETFPGWVHDV------LG------RNWACF--VGKKIS-ADSGVRVNPDPFPKKEML 159

  Fly   255 AYHSDTEHEHRKNIFRQNLRYIHSKNRAKLTYT-LAVNHLADKTEEELKARRGYKSSGIYNTGKP 318
            .          ..::..|..::...|..:.::| .|.......|.|:|..|.|.::|.|....:|
 Frog   160 T----------SRLYNYNHDFVKQINEVQKSWTATAYPEYEGMTIEDLIRRAGGRNSRIPMRPRP 214

  Fly   319 FPYDVPKYKDEIPDQYDWRL---YGAVTPVKDQSVCGSCWSFGTIGHLEGAFFLKNGGNLVRLSQ 380
            .|....:....:|.::|||.   |..||||::|:.||||::|.::|.||....:::     :|||
 Frog   215 APLPTDEKYQGLPTEWDWRNIAGYNFVTPVRNQASCGSCYAFSSMGMLESRIQIRS-----QLSQ 274

  Fly   381 ------QALIDCSWAYGNNGCDGGEDFRVYQWMLQSGGVPTEEEYGPYLGQDGYCHVNNVTLVAP 439
                  |.::.|| .| :.||:||..:.:....:...|: .||...||.|.|..|     ||...
 Frog   275 KPILSPQQVVSCS-NY-SQGCEGGFPYLIAGKYVSDYGI-VEESDLPYTGSDSPC-----TLKDS 331

  Fly   440 IKGFVNVTSNDPNAF---------KLALLKHGPLSVAIDASPKTFSFYSHGVYYEPTCK---NDV 492
            .:.:.....:....|         ||.|:..||||||.:.. ..|..|..|||:....:   |..
 Frog   332 QQKYYTAEYHYVGGFYGGCNEAYMKLELVLGGPLSVAFEVY-DDFMHYRSGVYHHTGLQDKFNPF 395

  Fly   493 DGLDHAVLAVGYGS--INGEDYWLVKNSWSTYWGNDGYILMSAKKNNCGVMTMPTYVE 548
            ...:||||.||||:  ..||.||:|||||...||..||..:....:.|.:.::....|
 Frog   396 QLTNHAVLLVGYGTDQQTGEKYWIVKNSWGESWGEKGYFRIRRGTDECAIESIAVSAE 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
26-29-pNP_620470.1 Inhibitor_I29 245..300 CDD:214853 7/55 (13%)
Peptidase_C1A 331..547 CDD:239068 77/238 (32%)
ctscXP_012812143.2 CathepsinC_exc 20..136 CDD:400909 39/222 (18%)
Peptidase_C1A_CathepsinC 226..455 CDD:239112 78/242 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1275401at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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