DRSC/TRiP Functional Genomics Resources

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Protein Alignment 26-29-p and Ctsc

DIOPT Version :9

Sequence 1:NP_620470.1 Gene:26-29-p / 39547 FlyBaseID:FBgn0250848 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_058793.1 Gene:Ctsc / 25423 RGDID:2445 Length:462 Species:Rattus norvegicus


Alignment Length:398 Identity:111/398 - (27%)
Similarity:167/398 - (41%) Gaps:82/398 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 RYEMRGYNTLLGSHYDHYYLDYDSYEHDDIPNEVFEIDDSLQCVGFPGPGTGHYATFNPMQEFIS 235
            :||::|...:             ||.|:.:...|.::      :|      .::|.|        
  Rat   106 KYEVKGSRAI-------------SYCHETMTGWVHDV------LG------RNWACF-------- 137

  Fly   236 GTDEHVDK--AFHHFKRKHGVAYHSDTEHEHRKNIFRQNLRYIHSKNRAKLTYTLAVNHLADKTE 298
                 |.|  |.|..|....||:....:.::.:.::..|..::.:.|..:.::|.......:|..
  Rat   138 -----VGKKMANHSEKVYVNVAHLGGLQEKYSERLYSHNHNFVKAINSVQKSWTATTYEEYEKLS 197

  Fly   299 -EELKARRGYKSSGIYNTGKPFPYDVPKYKDEI-------PDQYDWR-LYGA--VTPVKDQSVCG 352
             .:|..|.|:  ||.....||.|     ..|||       |:.:||| :.|.  |:||::|..||
  Rat   198 IRDLIRRSGH--SGRILRPKPAP-----ITDEIQQQILSLPESWDWRNVRGINFVSPVRNQESCG 255

  Fly   353 SCWSFGTIGHLEGAF-FLKNGGNLVRLSQQALIDCSWAYGNNGCDGGEDFRVYQWMLQSGGVPTE 416
            ||:||.::|.||... .|.|......||.|.::.|| .|. .|||||..:.:.....|..|| .|
  Rat   256 SCYSFASLGMLEARIRILTNNSQTPILSPQEVVSCS-PYA-QGCDGGFPYLIAGKYAQDFGV-VE 317

  Fly   417 EEYGPYLGQDGYC---------HVNNVTLVAPIKGFVNVTSNDPNAFKLALLKHGPLSVAIDASP 472
            |...||...|..|         :.:....|....|..|..     ..||.|:||||::||.:.. 
  Rat   318 ENCFPYTATDAPCKPKENCLRYYSSEYYYVGGFYGGCNEA-----LMKLELVKHGPMAVAFEVH- 376

  Fly   473 KTFSFYSHGVYYEPTCK---NDVDGLDHAVLAVGYGS--INGEDYWLVKNSWSTYWGNDGYILMS 532
            ..|..|..|:|:.....   |..:..:||||.||||.  :.|.|||:|||||.:.||..||..:.
  Rat   377 DDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGKDPVTGLDYWIVKNSWGSQWGESGYFRIR 441

  Fly   533 AKKNNCGV 540
            ...:.|.:
  Rat   442 RGTDECAI 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
26-29-pNP_620470.1 Inhibitor_I29 245..300 CDD:214853 8/55 (15%)
Peptidase_C1A 331..547 CDD:239068 79/228 (35%)
CtscNP_058793.1 CathepsinC_exc 25..138 CDD:400909 10/69 (14%)
Pox_I6 168..>204 CDD:333259 5/35 (14%)
Peptidase_C1A_CathepsinC 230..459 CDD:239112 79/229 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1275401at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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