DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-1 and SSZ1

DIOPT Version :9

Sequence 1:NP_524063.1 Gene:Hsc70-1 / 39542 FlyBaseID:FBgn0001216 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_011931.2 Gene:SSZ1 / 856461 SGDID:S000001106 Length:538 Species:Saccharomyces cerevisiae


Alignment Length:567 Identity:164/567 - (28%)
Similarity:266/567 - (46%) Gaps:93/567 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PAVGIDLGTTYSCVG-VFQHGKVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNPNNTIF 68
            |.:||..|.|.|.:. :.....|::|||..|.|..||.:::...:...|..|..|:..||.|||.
Yeast     4 PVIGITFGNTSSSIAYINPKNDVDVIANPDGERAIPSALSYVGEDEYHGGQALQQLIRNPKNTII 68

  Fly    69 DAKRLIGRRFDDATVQSDMKHWPFEVFAENGKPRIRVEYK---------GERKSFYPEEVSSMVL 124
            :.:..||..||...|..          ..||.|.:.|:.|         |:.:....:||.|..|
Yeast    69 NFRDFIGLPFDKCDVSK----------CANGAPAVEVDGKVGFVISRGEGKEEKLTVDEVVSRHL 123

  Fly   125 TKMRETAEAYLGGTVTDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKQG 189
            .:::..||.|:|..|.:||:|||..|::.|:.|.|.:.|..||.:::.||||:||.:|:......
Yeast   124 NRLKLAAEDYIGSAVKEAVLTVPTNFSEEQKTALKASAAKIGLQIVQFINEPSAALLAHAEQFPF 188

  Fly   190 TSERNVLIFDLGGGTFDVSVLTIEDGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFQRKHKKDLG 254
            ..:.||::.|.||...|.:|:.:.:|||.:.|||.|..|||::.|..||.:|..|||:|::.:..
Yeast   189 EKDVNVVVADFGGIRSDAAVIAVRNGIFTILATAHDLSLGGDNLDTELVEYFASEFQKKYQANPR 253

  Fly   255 QNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNGDLFRGTMEPVAK 319
            :|.|:|.:|:......|:|||::|.|:|.||||.:|.|::.|:.|.|:|.:...:|......|..
Yeast   254 KNARSLAKLKANSSITKKTLSNATSATISIDSLADGFDYHASINRMRYELVANKVFAQFSSFVDS 318

  Fly   320 ALRDAKMDKGQIHDIVLVGGSTRIPKVQRLLQ-------DFFNGKELNKSINPDEAVAYGAAVQA 377
            .:..|::|...|..::|.||.:..||:...|:       :....:..|.|.||:|..|.|||:||
Yeast   319 VIAKAELDPLDIDAVLLTGGVSFTPKLTTNLEYTLPESVEILGPQNKNASNNPNELAASGAALQA 383

  Fly   378 AILH----GDKSEAVQDLLLLDVTP---LSLGIETAGGVMTTLIKRNTTIPTKQTQIFTTYADNQ 435
            .::.    .:.:||:|.:::  .||   ..:|:..|.|....::...|:.|.::.   .|....:
Yeast   384 RLISDYDADELAEALQPVIV--NTPHLKKPIGLIGAKGEFHPVLLAETSFPVQKK---LTLKQAK 443

  Fly   436 PGVLIQVFEGERAMTRDNNSLGKFELSAIPPAPR------------------------------- 469
            ...||.|:||:.          ..|...:.|.|:                               
Yeast   444 GDFLIGVYEGDH----------HIEEKTLEPIPKEENAEEDDESEWSDDEPEVVREKLYTLGTKL 498

  Fly   470 ---GVPQ---VEVTFDIDANGILNVTALEKSTGKENRITITNDKGRL 510
               |:..   ||:.|:|:.:|.|.|||.:..||  |.:     ||.|
Yeast   499 MELGIKNANGVEIIFNINKDGALRVTARDLKTG--NAV-----KGEL 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-1NP_524063.1 PTZ00009 1..641 CDD:240227 164/567 (29%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 128/391 (33%)
SSZ1NP_011931.2 ScSsz1p_like_NBD 4..384 CDD:212674 128/389 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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