DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-1 and cpHsc70-1

DIOPT Version :9

Sequence 1:NP_524063.1 Gene:Hsc70-1 / 39542 FlyBaseID:FBgn0001216 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_194159.1 Gene:cpHsc70-1 / 828531 AraportID:AT4G24280 Length:718 Species:Arabidopsis thaliana


Alignment Length:649 Identity:305/649 - (46%)
Similarity:411/649 - (63%) Gaps:30/649 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTES-ERLIGDAAKNQVAMNPNNTIFDA 70
            ||||||||.|.|...:.||..|:.|.:|.|||||.||:|:| :||:|..||.|..:||.||.|..
plant    81 VGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKSGDRLVGQIAKRQAVVNPENTFFSV 145

  Fly    71 KRLIGRRFDDATVQSDMKHWPFEVFAENGKPRIRVEYKGERKSFYPEEVSSMVLTKMRETAEAYL 135
            ||.|||:.::  |..:.|...:.|..:... .:::|.....|.|..||:|:.||.|:.:.|..:|
plant   146 KRFIGRKMNE--VDEESKQVSYRVVRDENN-NVKLECPAINKQFAAEEISAQVLRKLVDDASRFL 207

  Fly   136 GGTVTDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKQGTSERNVLIFDL 200
            ...||.||:|||||||||||.||||||.||||.|||||||||||::|||.|::  :...:|:|||
plant   208 NDKVTKAVITVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFDRK--ANETILVFDL 270

  Fly   201 GGGTFDVSVLTIEDGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFQRKHKKDLGQNKRALRRLRT 265
            ||||||||||.:.||:|||.:|:|||||||:|||.|:|:....||::....||.::|:||:||..
plant   271 GGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAAEFKKDEGIDLLKDKQALQRLTE 335

  Fly   266 ACERAKRTLSSSTQASIEIDSLFEGVD----FYTSVTRARFEELNGDLFRGTMEPVAKALRDAKM 326
            |.|:||..|||.||.::.:..:....|    ..|::|||:||||..||......||..:|||||:
plant   336 AAEKAKIELSSLTQTNMSLPFITATADGPKHIETTLTRAKFEELCSDLLDRVRTPVENSLRDAKL 400

  Fly   327 DKGQIHDIVLVGGSTRIPKVQRLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEAVQDL 391
            ....|.:::|||||||||.||.|::. ..|||.|.::||||.||.||||||.:|.||    |.|:
plant   401 SFKDIDEVILVGGSTRIPAVQELVRK-VTGKEPNVTVNPDEVVALGAAVQAGVLAGD----VSDI 460

  Fly   392 LLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQIFTTYADNQPGVLIQVFEGERAMTRDNNSL 456
            :||||||||:|:||.|||||.:|.||||:||.::::|:|.||.|..|.|.|.:|||...|||.||
plant   461 VLLDVTPLSIGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSL 525

  Fly   457 GKFELSAIPPAPRGVPQVEVTFDIDANGILNVTALEKSTGKENRITITNDKGRLSKEDIERMVND 521
            |.|.|..||||||||||:||.|||||||||:|:|::|.|||:..||||. ...|.|:::::||.:
plant   526 GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITG-ASTLPKDEVDQMVQE 589

  Fly   522 AEAYRQADEQQRDRINAKNQLESYCFQLRSTLDDEHLSSRFSPADRETIQQRSSETIAWLDANQL 586
            ||.:.:.|:::||.|:.|||.:|..:|....|  :.|..:.....:|.::.:..|.   .|....
plant   590 AERFAKDDKEKRDAIDTKNQADSVVYQTEKQL--KELGEKIPGEVKEKVEAKLQEL---KDKIGS 649

  Fly   587 AERQEFEHKQQELERICSPIITRLYQ-----GAGMAPPPTAGGSNPG----ATGGSGPTIEEVD 641
            ...||.:.....|.:....|...||.     |.|..|.|...|::.|    :.||.|..:.:.|
plant   650 GSTQEIKDAMAALNQEVMQIGQSLYNQPGAGGPGAGPSPGGEGASSGDSSSSKGGDGDDVIDAD 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-1NP_524063.1 PTZ00009 1..641 CDD:240227 304/647 (47%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 191/378 (51%)
cpHsc70-1NP_194159.1 PLN03184 40..716 CDD:215618 305/649 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.