DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-1 and Hspa12b

DIOPT Version :9

Sequence 1:NP_524063.1 Gene:Hsc70-1 / 39542 FlyBaseID:FBgn0001216 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_082582.1 Gene:Hspa12b / 72630 MGIID:1919880 Length:685 Species:Mus musculus


Alignment Length:645 Identity:136/645 - (21%)
Similarity:233/645 - (36%) Gaps:175/645 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYSCVGVFQHGKVEII-------ANDQG--NRTTPSYVAFTESE--RLIGDAAKNQV- 59
            |.||.|||.|..........|.|       ..|.|  ::.||:.:..|...  ...|..|::.. 
Mouse    63 VAIDFGTTSSGYAFSFASDPEAIHMMRKWEGGDPGVAHQKTPTCLLLTPEGIFHSFGYTARDYYH 127

  Fly    60 AMNPNNT----IFDAKRLIGRRFDDATVQSDMKHWPFEVFAENGKPRIRVEYKGERKSFYPEEVS 120
            .::|...    .|:..::......|.|:::.::       |.|||..:.:|.......|:.|.  
Mouse   128 DLDPEEARDWLYFEKFKMKIHSATDLTLKTQLE-------AVNGKKMLALEVFAHALRFFKEH-- 183

  Fly   121 SMVLTKMRETAEAYLGGTVTDAVVTVPAYFNDSQRQATKDAGAIAGL------NVLRIINEPTAA 179
              .|.::||.:|..|.......|:||||.:....:|..::|..:|||      ..|.|..||.||
Mouse   184 --ALQELREQSECMLEKGAVRWVLTVPAIWKQPAKQFMREAAYLAGLVSREDAEKLLIALEPEAA 246

  Fly   180 AI----------------AYGLDKQG------TSERNV--------------------------- 195
            ::                ..|..:.|      :|.|:.                           
Mouse   247 SVYCRKLRLHQLMDLSSRTAGRGRLGERRSIDSSFRHAREQLRRSRHSRTFLVEAGVGELWAEMQ 311

  Fly   196 -----LIFDLGGGTFDVSVLTIED--GIFE--VKATAGDTHLGGED--FDNRLVNHFVQEFQRKH 249
                 ::.|.||||.|::|..:|.  |..:  .||:.|.....|.|  |:..|...|.::|..|.
Mouse   312 EGDRYMVADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDFIAKF 376

  Fly   250 KKDLGQNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFY--------------TSVTRA 300
            |:   |...|...|..|.|..|||.......::.|...|..:|||              :||...
Mouse   377 KR---QRPAAWVDLTIAFEARKRTAGPHRAGALNISLPFSFIDFYRKQRGHNVETALRRSSVNLV 438

  Fly   301 RFE---------ELNGDLFRGTMEPVAKALRD--AKMDKGQIHDIVLVGGSTRIPKVQRLLQDFF 354
            ::.         |...:||:.|:..:.:.:..  ||.:...:..:.||||......:|..:|:..
Mouse   439 KWSSQGMLRMSCEAMNELFQPTVSGIIQHIEMLLAKPEVQGVKLLFLVGGFAESAVLQHAVQEAL 503

  Fly   355 NGKELNKSINPDEAVAYGAAVQAAILHGDKSEAVQDLLLLDVTPLSLGIETAGGVMTTLI----- 414
            ..:.|...:..|..:   ..::.|:|.|.....|:    :..:||:.|:    ||:...:     
Mouse   504 GTRGLRVVVPHDVGL---TILKGAVLFGQAPGVVR----VRRSPLTYGV----GVLNRFVPGHHP 557

  Fly   415 ---------KRNTT------IPTKQT-----QIFTTYADNQPG---VLIQVF----EGERAMTRD 452
                     :|..|      :..:|:     ::..:|...:||   |||.::    |..|.:|  
Mouse   558 PEKLLVRDGRRWCTDVFERFVAAEQSVALGEEVRRSYCPARPGQRRVLINLYCCAAEDARFIT-- 620

  Fly   453 NNSLGKFELSAIPPAPRGVPQVEVTF----DIDA-----NGILNVTALEKSTGKENRITI 503
            :..:.|....::...|.|.|:...|.    :|.|     :..:.|||::.||.:..|..|
Mouse   621 DPGVRKCGALSLELEPEGCPENTGTSPSRREIRAAMQFGDTEIKVTAVDVSTNRSVRAAI 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-1NP_524063.1 PTZ00009 1..641 CDD:240227 136/645 (21%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 102/480 (21%)
Hspa12bNP_082582.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50
NBD_sugar-kinase_HSP70_actin 61..529 CDD:302596 103/482 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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