DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-1 and hspa14

DIOPT Version :10

Sequence 1:NP_524063.1 Gene:Hsc70-1 / 39542 FlyBaseID:FBgn0001216 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001038541.1 Gene:hspa14 / 565232 ZFINID:ZDB-GENE-041210-73 Length:504 Species:Danio rerio


Alignment Length:514 Identity:178/514 - (34%)
Similarity:290/514 - (56%) Gaps:31/514 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNPNNTIF 68
            :.|:|:..|.|.:||.||:.|:.:::|||.|:|.||:.||:.::|:::|.|||.....|..||:.
Zfish     1 MAAIGVHFGYTCACVAVFKDGRADVVANDAGDRVTPAVVAYRDTEQIVGIAAKQGRIRNAANTVV 65

  Fly    69 DAKRLIGRRFDDATVQSDMKHWPFEVFAENGKPRIRVEYKGERKSFYPEEVSSMVLTKMRETAEA 133
            ..|:::|||:||...|:..:.....|..::|.||..::.....|...||:|:.::..||:|||::
Zfish    66 KVKQILGRRYDDPDAQAHKEESKCIVVNKSGLPRYEIDTGETTKYVSPEDVAKLIFHKMKETAQS 130

  Fly   134 YLGGTVTDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKQG-TSERNVLI 197
            .||..|.|||:|||..|::.|:.|.:.|...||.||||:|:||:||.:||.:.:.. ..:.:||:
Zfish   131 ALGSDVKDAVITVPFEFDEMQKNALRQAAESAGFNVLRLIHEPSAALLAYDIGQDSPLGKSHVLV 195

  Fly   198 FDLGGGTFDVSVLTIEDGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFQRKHKKDLGQNKRALRR 262
            :.|||.:..|:||.:..|::.|.||..|...|||.|...|..|...||::..|:|:..|.||:.:
Zfish   196 YKLGGTSLSVTVLEVNSGVYRVLATQTDHQTGGESFTQELAQHLAAEFKKTFKQDVSGNARAMMK 260

  Fly   263 LRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNGDLFRGTMEPVAKALRDAKMD 327
            |..:.:.||.|||:...|:..:|||::|:||..:|:|||||.:...||...::|:...|....:.
Zfish   261 LMNSADVAKHTLSTLGSANCFVDSLYDGMDFECNVSRARFELICSSLFNKCIQPIKSLLEQVNLS 325

  Fly   328 KGQIHDIVLVGGSTRIPKVQRLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEAV-QDL 391
            ...::.:||.|||.||||:|::::|.|...||..||.|||.:..|||:||.||.|..|.|: :|.
Zfish   326 TSDVNKVVLSGGSARIPKLQQMIRDLFPDVELLNSIPPDEVIPVGAAMQAGILVGKDSLALGEDS 390

  Fly   392 LLLD--VTPLSL------GIETAGGVMTTLIKRNTTIPTKQTQIFTTYADNQPG----VLIQVFE 444
            :.:|  .:.::|      |:|    |.|.|....|.:|.::....     ..||    |.:|:|:
Zfish   391 ITVDCCASDITLKEVDDSGLE----VFTVLFPSGTPLPARRQHTL-----QGPGSLSSVRLQLFQ 446

  Fly   445 GERAMTRDNNSLGKFELSAIPPAPRGVPQVEVTFDIDANGILNVTALEKSTGKENRITI 503
            .::       .:.:..|..:.|... :..|.....:..:|.|:||..|:|:|:...|||
Zfish   447 AQQ-------PIAQIVLGDLEPKEE-LHDVVTVLTMKRDGSLHVTCTEQSSGRSEAITI 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-1NP_524063.1 PTZ00009 1..641 CDD:240227 178/514 (35%)
hspa14NP_001038541.1 ASKHA_NBD_HSP70_HSPA14 2..378 CDD:466836 145/375 (39%)

Return to query results.
Submit another query.