DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-1 and hspa13

DIOPT Version :9

Sequence 1:NP_524063.1 Gene:Hsc70-1 / 39542 FlyBaseID:FBgn0001216 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001082948.1 Gene:hspa13 / 560481 ZFINID:ZDB-GENE-070410-58 Length:438 Species:Danio rerio


Alignment Length:399 Identity:165/399 - (41%)
Similarity:236/399 - (59%) Gaps:29/399 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PKLPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNPN 64
            ||...:|:|||||:..|||||  .|::|||.:|:|.::.||.|:||.:....|...:....:||.
Zfish    29 PKPRVIGLDLGTTFCSVGVFQPGTGEIEIIEDDKGRKSIPSVVSFTLTGVFAGHEGQELSDVNPQ 93

  Fly    65 NTIFDAKRLIGRRFDDATVQSDMKHWPFEVFAENGKPRIRVEYKGERKSFYPEEVSSMVLTKMRE 129
            |||:||||.||:.||:.|::.:...:||:|...||.....|. .....:..||.:.|.:|.|||:
Zfish    94 NTIYDAKRFIGKIFDEETLEKESARYPFKVIFNNGSADFLVN-TNSTFTVTPEFIGSRLLLKMRK 157

  Fly   130 TAEAYLGGTVTDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKQGTSERN 194
            .||..||..|..||::|||.|::.||..|..|..:|||:|||:||||||||:||||.|  ....|
Zfish   158 MAEKQLGVPVEKAVISVPAEFDERQRNYTIRAANLAGLDVLRVINEPTAAAMAYGLHK--AEVFN 220

  Fly   195 VLIFDLGGGTFDVSVLTIEDGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFQRKH------KKDL 253
            ||:.||||||.|||:|..:.|:|..:|.||:..|||:||..||:.:..:..::::      |:| 
Zfish   221 VLVVDLGGGTLDVSLLNKQGGMFLTRAMAGNNQLGGQDFTQRLLQYTTERVRQQYGVPPTLKED- 284

  Fly   254 GQNKRALRRLRTACERAKRTLSSSTQASIEIDSLF----------EGVDFYTSVTRARFEELNGD 308
                  :..||.|.|.||..|:......:.:....          |.|.|...:||..|||||.|
Zfish   285 ------IHLLRQAVEAAKLNLTQEPHVHLRVPLYLQMTGASGAQEEKVLFEEKLTRETFEELNAD 343

  Fly   309 LFRGTMEPVAKALRDAKMDKGQIHDIVLVGGSTRIPKVQRLLQDFFNGKELNKSINPDEAVAYGA 373
            ||:..:.|:...|.:..:||.::.:|||||||||||::::|:..:| |||.|.|::||.||..|.
Zfish   344 LFQKILAPIETVLVEGHLDKQEVDEIVLVGGSTRIPRIRQLISQYF-GKEPNTSVDPDLAVVTGV 407

  Fly   374 AVQAAILHG 382
            |:||.|:.|
Zfish   408 AIQAGIMGG 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-1NP_524063.1 PTZ00009 1..641 CDD:240227 165/399 (41%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 162/392 (41%)
hspa13NP_001082948.1 HSPA13-like_NBD 23..430 CDD:212679 165/399 (41%)
PRK13930 32..409 CDD:237564 158/387 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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