DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-1 and hspa12a.2

DIOPT Version :10

Sequence 1:NP_524063.1 Gene:Hsc70-1 / 39542 FlyBaseID:FBgn0001216 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001429582.1 Gene:hspa12a.2 / 559237 ZFINID:ZDB-GENE-061009-20 Length:571 Species:Danio rerio


Alignment Length:608 Identity:133/608 - (21%)
Similarity:234/608 - (38%) Gaps:164/608 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYSCVGVF----QHGKVEIIAN---DQGNRT--TPSYVAFTESE--RLIGDAAKNQVA 60
            :.||.||:||...:.    |..:..:|.|   |.|..|  ||:.:.|.|.|  :..|        
Zfish     8 IAIDFGTSYSGYAISFKTKQPQESILIPNWGVDYGYNTFKTPTCILFDEHETFQKFG-------- 64

  Fly    61 MNPNNTIFDAKRLIGRRFDDATVQSD------MKHWPFEVF-----------AENGKPRIRVEYK 108
                   :||.....|    :||:|.      .:|:..|::           |:||         
Zfish    65 -------YDAMMTYTR----STVKSQARKSFLFEHFKMELYDKEIHRDLMITAKNG--------- 109

  Fly   109 GERKSF--YPEEVSSM---VLTKMRE--TAEAYLGGTVTDAVVTVPAYFNDSQRQATKDAGAIAG 166
            |:.|:.  :.|.:..:   .|.|::|  |.:.::...|| .|:||||.:|.:.:|..::|...||
Zfish   110 GQMKALTVFSESLRYLKDHALEKVKENPTGKTFIASDVT-WVLTVPAIWNAAAKQFMREAAIEAG 173

  Fly   167 LNV------LRIINEPTAAAI------AYGL-----------DKQGTSERNVLIFDLGGGTFDVS 208
            |.:      |....||.||:|      :.|.           .|.||   ..::.|.||||.|::
Zfish   174 LVIESEPERLVFALEPEAASIYCKHLPSEGYISEEACRDTLEQKPGT---QYMVVDCGGGTIDIT 235

  Fly   209 V-LTIEDG-IFEVKATAGDTHLGG------------EDFDNRLVNHFVQEFQR---KHKKDLGQN 256
            | ..:||| :.|:.|.:|: .:||            |.|..::.|.|.|:|..   |.|.|:...
Zfish   236 VHEVVEDGKLKELNAASGN-DMGGQTVDRKFISFLKEIFSEKIYNKFEQDFPAEALKLKYDIALA 299

  Fly   257 KRALRRLRTACERAKRTLSSSTQASIEIDSLFEGV------DFYTSVTRARFEELNGDLFRGTME 315
            |...:.:...|....:.|:...:|   |:|.||||      :....:...:.:....:..:.|.|
Zfish   300 KSCDQLVLIQCPVTLQELAKKEKA---IESYFEGVEGAEWDEGSIIIKEDKLQSFFDESLKTTAE 361

  Fly   316 PVAKALRDAKMDKGQIHDIVLVGGSTRIPKVQRLLQDFFNGKELNKSINPD-------------- 366
            .:.|...:.:::   |..::||||......:::.|::.|:..::...:.|.              
Zfish   362 KLEKITSNPELN---IEYMLLVGGFAECKILKKFLKERFDKCKIVCPVEPQVVIIKGAIRYAKQP 423

  Fly   367 -------EAVAYGAAVQA---AILHGDKSEAVQDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIP 421
                   .|:.||..:.|   .:||.|||..|.          |.|.........|.:::..::.
Zfish   424 KVVKSRMSALTYGIRIDAPFDKVLHKDKSNYVN----------SEGQTYCDVCFETFVRKGESVN 478

  Fly   422 TKQTQ--IFTTYADNQPGVLIQVFEGERAMTR--DN---NSLGKFELSAIPPAPRGVPQVEVTFD 479
            ..:.:  .|.....||...:.|.|.......:  |.   ..:|.||: .:|....|:.: |:..:
Zfish   479 CDEVRQFFFNPSHTNQTSAIFQFFSTNEKQVQFIDEPGVEPVGFFEV-GMPKTDGGLSR-EIKLE 541

  Fly   480 IDANGI-LNVTALEKSTGKENRI 501
            |..... :..||.:..:|:...:
Zfish   542 IKFGSTEMKATATDVDSGETTSV 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-1NP_524063.1 PTZ00009 1..641 CDD:240227 133/608 (22%)
hspa12a.2NP_001429582.1 None

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