DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-1 and Hsc70Cb

DIOPT Version :9

Sequence 1:NP_524063.1 Gene:Hsc70-1 / 39542 FlyBaseID:FBgn0001216 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster


Alignment Length:699 Identity:201/699 - (28%)
Similarity:334/699 - (47%) Gaps:107/699 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNPNNTIF 68
            :..:|||.|.....|...:.|.:|.:|||...|.|||:|||...:|:||.|||||...|..||:.
  Fly     1 MSVIGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVG 65

  Fly    69 DAKRLIGRRFDDATVQSDMKHWPFEVFAE-NGKPRIRVEYKGERKSFYPEEVSSMVLTKMRETAE 132
            ..|||:||:|:|..||.::...|..|.|. :|...|:|.|.||.:.|.||::::|:.||::||:.
  Fly    66 GFKRLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSA 130

  Fly   133 AYLGGTVTDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKQGTSE---RN 194
            |.:...|.|.|:..|.:|.:::|:|..||..||||||||::||.||.|:|||..|....|   ||
  Fly   131 AAMQTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRN 195

  Fly   195 VLIFDLGGGTFDVSVLTIEDGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFQRKHKKDLGQNKRA 259
            |:..|.|..:...|......|..::.|:..| .:||.|.|..|.::|.:|||.::|.:...|.||
  Fly   196 VIFVDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYFAKEFQERYKINAKTNARA 259

  Fly   260 LRRLRTACERAKRTLS-SSTQASIEIDSLFEGVDFYTSVTRARFEELNGDLFRGTMEPVAKALRD 323
            ..||.|..|:.|:.:| :||:..:.|:...:.:|..:|:.|::.|||...:.:...:...:.|.:
  Fly   260 NLRLLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLLAE 324

  Fly   324 AKMDKGQIHDIVLVGGSTRIPKVQRLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEAV 388
            :|:....||.:.:||||:|||.|::|::..|| |..:.::|.||||:.|||:|.||:  ..:..|
  Fly   325 SKLQLDDIHSVEIVGGSSRIPSVKQLIEQVFN-KPASTTLNQDEAVSRGAALQCAIM--SPAVRV 386

  Fly   389 QDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQIFTTY---------ADNQPGVL-IQVF 443
            ::..:.|:...::.:         |.....:....:.:||..|         ..|:.|.. :.:.
  Fly   387 REFGVTDIQNYAVKV---------LWDSEGSAAPGEIEIFPQYHASPFSRLLTINRKGPFNVSIV 442

  Fly   444 EGERAMTRDNNSLGKFELSAIPPAPRGVPQ-VEVTFDIDANGIL---NVTALEKSTGKE------ 498
            .|::....| .::|.:::..:.|..||..| |::...|:.|||:   :.|.:||...:|      
  Fly   443 YGQQVPYPD-QTIGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKEAEEAAAAAE 506

  Fly   499 ---------------------------------NRITITN------------------DKGRLSK 512
                                             |..|.::                  ||.:.:.
  Fly   507 QAASEEKPGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGADKKKKAS 571

  Fly   513 EDIERMVN---------DAEAYRQA-------DEQQRDRINAKNQLESYCFQLRSTLDDEHLSSR 561
            :..|..:.         |...|.|.       |:::.:||:|||.||.:.:.:|:.|........
  Fly   572 KATELPLECTTHGFSPVDLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKLQGGPFERY 636

  Fly   562 FSPADRETIQQRSSETIAWL-DANQLAERQEFEHKQQELERICSPIITR 609
            ...|:||.|..:.::...|| :..:..||..:..:.|.|.:...||..|
  Fly   637 VVEAEREKIVSQLNDLENWLYEDGEDCERDIYTSRLQALHQKTDPIKLR 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-1NP_524063.1 PTZ00009 1..641 CDD:240227 201/699 (29%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 146/379 (39%)
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 146/382 (38%)
HSP70 3..682 CDD:278441 198/692 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464204
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.