DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-1 and hspa9

DIOPT Version :9

Sequence 1:NP_524063.1 Gene:Hsc70-1 / 39542 FlyBaseID:FBgn0001216 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_958483.2 Gene:hspa9 / 373085 ZFINID:ZDB-GENE-030828-12 Length:682 Species:Danio rerio


Alignment Length:645 Identity:316/645 - (48%)
Similarity:420/645 - (65%) Gaps:48/645 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-ESERLIGDAAKNQVAMNPNNTIFDA 70
            :|||||||.|||.|......:::.|.:|.|||||.|||| :.|||:|..||.|...|||||::..
Zfish    59 IGIDLGTTNSCVAVMDGKNAKVLENAEGARTTPSVVAFTSDGERLVGMPAKRQAVTNPNNTLYAT 123

  Fly    71 KRLIGRRFDDATVQSDMKHWPFEVF-AENGKPRIRVEYKGERKSFYPEEVSSMVLTKMRETAEAY 134
            |||||||||||.||.|:|:.|:::. |.||...:.|    ..|.:.|.:..:.:|.||:||||:|
Zfish   124 KRLIGRRFDDAEVQKDLKNVPYKIVRASNGDAWLEV----HGKMYSPSQAGAFILIKMKETAESY 184

  Fly   135 LGGTVTDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKQGTSERNVLIFD 199
            ||.:|.:|||||||||||||||||||||.||||||||:||||||||:||||||  |.::.:.::|
Zfish   185 LGQSVKNAVVTVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGLDK--TQDKIIAVYD 247

  Fly   200 LGGGTFDVSVLTIEDGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFQRKHKKDLGQNKRALRRLR 264
            |||||||:|||.|:.|:||||:|.|||.|||||||..|:.|.|:||:::...||.::..||:|:|
Zfish   248 LGGGTFDISVLEIQKGVFEVKSTNGDTFLGGEDFDQHLLRHIVKEFKKESGVDLMKDNMALQRVR 312

  Fly   265 TACERAKRTLSSSTQASIEIDSLFEGVD----FYTSVTRARFEELNGDLFRGTMEPVAKALRDAK 325
            .|.|:||..||||.|..|.:..|.....    ....:||::||.:..||.|.|:.|..||::||:
Zfish   313 EAAEKAKCELSSSLQTDINLPYLTMDASGPKHLNMKLTRSQFEGIVADLIRRTVAPCQKAMQDAE 377

  Fly   326 MDKGQIHDIVLVGGSTRIPKVQRLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEAVQD 390
            :.|..|.:::||||.||:||||:.:||.| |:..:||:|||||||.|||:|..:|.||    |.|
Zfish   378 VSKSDIGEVLLVGGMTRMPKVQQTVQDLF-GRAPSKSVNPDEAVAIGAAIQGGVLAGD----VTD 437

  Fly   391 LLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQIFTTYADNQPGVLIQVFEGERAMTRDNNS 455
            :||||||||||||||.|||.|.||.||||||||::|:|:|.||.|..|.|:|.:|||.|..||..
Zfish   438 VLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMATDNKV 502

  Fly   456 LGKFELSAIPPAPRGVPQVEVTFDIDANGILNVTALEKSTGKENRITITNDKGRLSKEDIERMVN 520
            ||:|.|..||||.|||||:|||||||||||::|:|.:|.||:|.:|.| ...|.|||:|||.||.
Zfish   503 LGQFTLVGIPPALRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVI-QSSGGLSKDDIENMVK 566

  Fly   521 DAEAYRQADEQQRDRINAKNQLESYCFQLRSTLDD--EHLSSRFSPAD------------RETIQ 571
            :||.|.:.|.:::||:.|.|..|.......|.:::  :.|     |||            ||.:.
Zfish   567 NAEKYAEEDRRRKDRVEAVNMAEGIVHDTESKMEEFKDQL-----PADECNKLKEEISKVRELLS 626

  Fly   572 QRSSETIAWLDANQLAERQEFEHKQQELERICSPIITRLYQGAGMAPPPTAGGSNPGATG 631
            ::.:||           .:..:.....|::....:....|:........::|.|:.|..|
Zfish   627 RKDTET-----------GENIKQAATSLQQASLKLFEMAYKKMASEREGSSGSSSSGEAG 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-1NP_524063.1 PTZ00009 1..641 CDD:240227 316/645 (49%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 203/379 (54%)
hspa9NP_958483.2 HSPA9-like_NBD 55..431 CDD:212683 203/378 (54%)
dnaK 56..659 CDD:234715 312/627 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.