DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-1 and lsh1

DIOPT Version :9

Sequence 1:NP_524063.1 Gene:Hsc70-1 / 39542 FlyBaseID:FBgn0001216 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_592867.1 Gene:lsh1 / 2541537 PomBaseID:SPAC1F5.06 Length:848 Species:Schizosaccharomyces pombe


Alignment Length:641 Identity:166/641 - (25%)
Similarity:288/641 - (44%) Gaps:90/641 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNPNNTIFDA 70
            :.||.||.::...:.:.| .:||:......|...|.|||..:||:.|..|.|.....|.::|.:.
pombe    25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAHSIRNV 89

  Fly    71 KRLIGRR-FDDATVQSDMKHWPFEVFAENGKPRIRVEYK-GERKSFYPEEVSSMVLTKMRETAEA 133
            |.|:... .:...||.....:|.....||.:....:.:. .:.:::..||:.:|.:......||.
pombe    90 KELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEIIAMTMEHYISLAEE 154

  Fly   134 YLGGTVTDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKQ-GTSERNVLI 197
            .....:||.|:|||.:||:.||....:|..|...:||.:|::..|.||.|.|.:. .|.....:|
pombe   155 MAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNII 219

  Fly   198 FDLGGGTFDVSVL---TIE-------DGIFEVKATA-GDT-HLGGEDFDNRLVNHFVQEFQRKHK 250
            :|.|.|:...:|:   |:|       ..|..::|.| |.| .|.|.:.:.:|:......|.:||.
pombe   220 YDSGSGSTSATVISFDTVEGSSLGKKQNITRIRALASGFTLKLSGNEINRKLIGFMKNSFYQKHG 284

  Fly   251 KDLGQNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNGDLFRGTME 315
            .||..|.|||.||.....|.|..||::::|...|:.|.:|:||...:||:..|.|..|:....:|
pombe   285 IDLSHNHRALARLEKEALRVKHILSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVE 349

  Fly   316 PVAKALRDAKMDKGQIHDIVLVGGSTRIPKVQRLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 380
            |:.|||:.|.:...:|:.|:|.||::|||.:|..|.|:.:..:::|::|.|||...|||...|.|
pombe   350 PINKALKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADEASVKGAAFYGASL 414

  Fly   381 HGDKSEAVQDLLLLDVT--PLSLGIETAGGVMTTL------IKRNTTIPTKQTQIFTTYADNQPG 437
              .||..|:.|::.|:.  |..|.:.|:..::...      ::.|.||....|      ....|.
pombe   415 --TKSFRVKPLIVQDIINYPYLLSLGTSEYIVALPDSTPYGMQHNVTIHNVST------IGKHPS 471

  Fly   438 VLIQVFEGERAMTRDNNSLGKFELSAIPPAPR----GVPQVEVTFDID-ANGIL-NVTAL----- 491
            .         .::.:...:|:|.||.|....:    ....::::|..| ..||| .::|:     
pombe   472 F---------PLSNNGELIGEFTLSNITDVEKVCACSNKNIQISFSSDRTKGILVPLSAIMTCEH 527

  Fly   492 -EKST------------GKENRITITNDKG------------------RLSKEDIERMVNDAEAY 525
             |.|:            |..:...:.|::.                  ||:...:||.:      
pombe   528 GELSSKHKLGDRVKSLFGSHDESGLRNNESYPIGFTYKKYGEMSDNALRLASAKLERRL------ 586

  Fly   526 RQADEQQRDRINAKNQLESYCFQLRSTLDDEHLSSRFSPADRETIQQRSSETIAWL 581
             |.|:.:....||.|:||:..::.::.:||:......:|.:.:.::..|.|:..||
pombe   587 -QIDKSKAAHDNALNELETLLYRAQAMVDDDEFLEFANPEETKILKNDSVESYDWL 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-1NP_524063.1 PTZ00009 1..641 CDD:240227 166/641 (26%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 119/389 (31%)
lsh1NP_592867.1 DnaK 19..667 CDD:223520 166/641 (26%)
HYOU1-like_NBD 25..412 CDD:212672 118/386 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19375
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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