DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-1 and hsp-4

DIOPT Version :9

Sequence 1:NP_524063.1 Gene:Hsc70-1 / 39542 FlyBaseID:FBgn0001216 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001370395.1 Gene:hsp-4 / 174203 WormBaseID:WBGene00002008 Length:657 Species:Caenorhabditis elegans


Alignment Length:612 Identity:367/612 - (59%)
Similarity:486/612 - (79%) Gaps:6/612 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--ESERLIGDAAKNQVAMNPNNTIFD 69
            :||||||||||||||::|:|||||||||||.|||||||:  :.|||||||||||:.:||.|||||
 Worm    33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPENTIFD 97

  Fly    70 AKRLIGRRFDDATVQSDMKHWPFEVFAENGKPRIRVEYKGERKSFYPEEVSSMVLTKMRETAEAY 134
            |||||||.:::.|||.|:|||||::..::.||.:.|:...|.|.|.|||||:||||||::.||:|
 Worm    98 AKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAMVLTKMKQIAESY 162

  Fly   135 LGGTVTDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKQGTSERNVLIFD 199
            ||..|.:|||||||||||:|:|||||||:||||||:|||||||||||||||||: ..|||:|:||
 Worm   163 LGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGLNVVRIINEPTAAAIAYGLDKK-DGERNILVFD 226

  Fly   200 LGGGTFDVSVLTIEDGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFQRKHKKDLGQNKRALRRLR 264
            |||||||||:|||:.|:|||.||.|||||||||||.|::.:|::.:::|..|||.::.||:::||
 Worm   227 LGGGTFDVSLLTIDSGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKSGKDLRKDNRAVQKLR 291

  Fly   265 TACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNGDLFRGTMEPVAKALRDAKMDKG 329
            ...|:|||.||:..|..|||:|||:|.||..::|||:|||||.||||.|::||.|.|.||.|.|.
 Worm   292 REVEKAKRALSTQHQTKIEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDADMKKT 356

  Fly   330 QIHDIVLVGGSTRIPKVQRLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEAVQDLLLL 394
            .:|:||||||||||||||:|::|:|||||.::.|||||||||||||||.::.|  .|...|::||
 Worm   357 DVHEIVLVGGSTRIPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLL 419

  Fly   395 DVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQIFTTYADNQPGVLIQVFEGERAMTRDNNSLGKF 459
            ||.||:|||||.|||||.||.|||.||||::|:|:|.||:|..|.|.::||||.|..||:.||.|
 Worm   420 DVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNF 484

  Fly   460 ELSAIPPAPRGVPQVEVTFDIDANGILNVTALEKSTGKENRITITNDKGRLSKEDIERMVNDAEA 524
            :::.||||||||||:||||:||.||||:|:|.:|.||.:|::|||||..|||.||||||:|||:.
 Worm   485 DVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADK 549

  Fly   525 YRQADEQQRDRINAKNQLESYCFQLRSTL-DDEHLSSRFSPADRETIQQRSSETIAWLDANQLAE 588
            :...|:.|::::.::|:||:|.:|:::.: |.|.|..:.:..|:.:|:......|.||.:||.|.
 Worm   550 FAADDQAQKEKVESRNELEAYAYQMKTQIADKEKLGGKLTDEDKVSIESAVERAIEWLGSNQDAS 614

  Fly   589 RQEFEHKQQELERICSPIITRLYQGAG 615
            .:|.:.:::|||.:..||:::||...|
 Worm   615 TEENKEQKKELESVVQPIVSKLYSAGG 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-1NP_524063.1 PTZ00009 1..641 CDD:240227 367/612 (60%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 251/375 (67%)
hsp-4NP_001370395.1 PTZ00009 33..643 CDD:240227 367/612 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53894
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.730

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