DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-1 and Hspa13

DIOPT Version :9

Sequence 1:NP_524063.1 Gene:Hsc70-1 / 39542 FlyBaseID:FBgn0001216 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_084477.1 Gene:Hspa13 / 110920 MGIID:1309463 Length:471 Species:Mus musculus


Alignment Length:424 Identity:163/424 - (38%)
Similarity:237/424 - (55%) Gaps:50/424 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPKLPAVGIDLGTTYSCVGVF--QHGKVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNP 63
            :|....:||||||||..||||  ..|||::|.::.|:.:.||.|:||:.:..:|..:......||
Mouse    28 LPTPKVIGIDLGTTYCSVGVFFPGTGKVKVIPDENGHISIPSMVSFTDGDVYVGYESLELADSNP 92

  Fly    64 NNTIFDAKRLIGRRFDDATVQSDMKHWPFEVFAENGKPRIRVEYKGERKSFYPEEVSSMVLTKMR 128
            .|||:||||.||:.|....:::::..:||:|...||.....|. ..|.....||.|.|.:|.|::
Mouse    93 QNTIYDAKRFIGKIFTPEELEAEVGRYPFKVLHRNGMAEFSVT-SNETIIVSPEFVGSRLLLKLK 156

  Fly   129 ETAEAYLGGTVTDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKQGTSER 193
            |.||.|||..|.:||::|||.|:..||.:|..|..:|||.:||:||||||||:||||.|  ....
Mouse   157 EMAEEYLGMPVANAVISVPAEFDLQQRNSTIQAANLAGLKILRVINEPTAAAMAYGLHK--VDVF 219

  Fly   194 NVLIFDLGGGTFDVSVLTIEDGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFQRKHKKDLGQNKR 258
            .||:.||||||.|||:|..:.|:|..:|.:|:..|||:||:.||:.|..:|..:.: ..|...|.
Mouse   220 YVLVIDLGGGTLDVSLLNKQGGMFLTRAMSGNNKLGGQDFNQRLLQHLYKEIYQTY-GFLPSRKE 283

  Fly   259 ALRRLRTACERAKRTLSSSTQASIEIDSLFEGVD------------------------------- 292
            .:.|||.|.|..|..|:....|.:.:....||.|                               
Mouse   284 EIHRLRQAVEMVKLNLTIHQSAQVSVLLTVEGKDSKEPQNGDSELPKDQLTPGDGHHVNRVFRPG 348

  Fly   293 ------------FYTSVTRARFEELNGDLFRGTMEPVAKALRDAKMDKGQIHDIVLVGGSTRIPK 345
                        |.|.|:|..|:.||.|||:..:.|:.:.|::..:||.:|.::||||||||||:
Mouse   349 LSESKSGKSQVLFETEVSRKLFDALNEDLFQKILVPIQQVLKEGLLDKTEIDEVVLVGGSTRIPR 413

  Fly   346 VQRLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 379
            :::::|:|| ||:.|.|::||.||..|.|:||.|
Mouse   414 IRQVIQEFF-GKDPNTSVDPDLAVVTGVAIQAGI 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-1NP_524063.1 PTZ00009 1..641 CDD:240227 163/424 (38%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 162/419 (39%)
Hspa13NP_084477.1 HSPA13-like_NBD 12..463 CDD:212679 163/424 (38%)
PRK13930 32..442 CDD:237564 158/414 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..350 1/32 (3%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.