DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-1 and hspa2

DIOPT Version :9

Sequence 1:NP_524063.1 Gene:Hsc70-1 / 39542 FlyBaseID:FBgn0001216 Length:641 Species:Drosophila melanogaster
Sequence 2:XP_004917261.1 Gene:hspa2 / 100496396 XenbaseID:XB-GENE-992125 Length:633 Species:Xenopus tropicalis


Alignment Length:639 Identity:495/639 - (77%)
Similarity:560/639 - (87%) Gaps:13/639 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNPNNTIFD 69
            |||||||||||||||||||||||||||:|||||||||||||::|||||||||||||:||.|||||
 Frog     6 PAVGIDLGTTYSCVGVFQHGKVEIIANEQGNRTTPSYVAFTDTERLIGDAAKNQVALNPANTIFD 70

  Fly    70 AKRLIGRRFDDATVQSDMKHWPFEVFAENGKPRIRVEYKGERKSFYPEEVSSMVLTKMRETAEAY 134
            |||||||||||.|||:|||||||.|.::.|||:::||:|||.|:|:|||:|||||:||:|.||||
 Frog    71 AKRLIGRRFDDPTVQADMKHWPFTVVSDGGKPKVKVEFKGENKTFFPEEISSMVLSKMKEVAEAY 135

  Fly   135 LGGTVTDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKQGT--SERNVLI 197
            ||..|.:||:||||||||||||||||||.|:|:||||||||||||||||||||:|.  .|.||||
 Frog   136 LGVKVPNAVITVPAYFNDSQRQATKDAGVISGINVLRIINEPTAAAIAYGLDKKGAGHGETNVLI 200

  Fly   198 FDLGGGTFDVSVLTIEDGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFQRKHKKDLGQNKRALRR 262
            |||||||||||||||:.||||||:|||||||||||||||:|.|||:||:||:|||:..||||:||
 Frog   201 FDLGGGTFDVSVLTIDGGIFEVKSTAGDTHLGGEDFDNRMVAHFVEEFKRKNKKDISGNKRAVRR 265

  Fly   263 LRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNGDLFRGTMEPVAKALRDAKMD 327
            |||||||||||||||||||:|||||:||.||||::||||||||..||||||:|||.|||||||:|
 Frog   266 LRTACERAKRTLSSSTQASLEIDSLYEGADFYTAITRARFEELCADLFRGTLEPVEKALRDAKLD 330

  Fly   328 KGQIHDIVLVGGSTRIPKVQRLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEAVQDLL 392
            |.||.:||||||||||||||:||||||||:|||||||||||||||||||||||.||||..|||||
 Frog   331 KAQIREIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILSGDKSHNVQDLL 395

  Fly   393 LLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQIFTTYADNQPGVLIQVFEGERAMTRDNNSLG 457
            ||||.||||||||||||||.|||||||||:||||.||||:|||..||:||:|||||||||||.||
 Frog   396 LLDVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQSSVLVQVYEGERAMTRDNNLLG 460

  Fly   458 KFELSAIPPAPRGVPQVEVTFDIDANGILNVTALEKSTGKENRITITNDKGRLSKEDIERMVNDA 522
            ||:|:.||||||||||:||||||||||||||||.:|||||||:||||||||||||||||||||||
 Frog   461 KFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKEDIERMVNDA 525

  Fly   523 EAYRQADEQQRDRINAKNQLESYCFQLRSTLDDEHLSSRFSPADRETIQQRSSETIAWLDANQLA 587
            |.|:..||..|||:.|||.||||.:.::.|.:||.|..:.|..::..|..:..|.|.||:.||:|
 Frog   526 EKYKAEDELNRDRVAAKNGLESYAYHIKQTAEDEKLKGKLSEKEKSQILDKCKEVIDWLEKNQMA 590

  Fly   588 ERQEFEHKQQELERICSPIITRLYQGAGMAPPPTAGGSNPGATGGSGPTIEEVD 641
            |:.||||||:|||::|:||||:||||         |..|||..|  ||||||||
 Frog   591 EKDEFEHKQKELEKVCNPIITKLYQG---------GAPNPGTAG--GPTIEEVD 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-1NP_524063.1 PTZ00009 1..641 CDD:240227 493/637 (77%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 312/376 (83%)
hspa2XP_004917261.1 PTZ00009 2..633 CDD:240227 493/637 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D180577at33208
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X148
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.