DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-1 and hspa12a

DIOPT Version :9

Sequence 1:NP_524063.1 Gene:Hsc70-1 / 39542 FlyBaseID:FBgn0001216 Length:641 Species:Drosophila melanogaster
Sequence 2:XP_002941887.2 Gene:hspa12a / 100489323 XenbaseID:XB-GENE-959285 Length:664 Species:Xenopus tropicalis


Alignment Length:664 Identity:132/664 - (19%)
Similarity:219/664 - (32%) Gaps:226/664 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYS-----------CVGVFQHGKVEIIANDQG--NRTTPSYVAFTESERLIGDAAKNQ 58
            |.||.|||.|           |:.:.:..:    ..|.|  |:.||:.:......:         
 Frog    56 VAIDFGTTSSGYAYSFSKEPECIHIMRRWE----GGDPGVSNQKTPTTMLLMPDRK--------- 107

  Fly    59 VAMNPNNTIFDAKRLIGRRFDDATVQSDMKHWPF------------------EVFAENGKPRIRV 105
                     |.:.....|.|......|:.|||.:                  |:.|.|||....:
 Frog   108 ---------FHSFGFAARDFYHDLDPSESKHWLYFEKFKMKLHSSTDLTMETELTAANGKRVKAL 163

  Fly   106 EYKGERKSFYPEEVSSMVLTKMRETAEAYLGGTVTDAVVTVPAYFNDSQRQATKDAGAIAGL--- 167
            |.......::.|:    .|.::.:.|.:.:.......|:||||.:....:|..:.|...||:   
 Frog   164 EIFAYALQYFKEQ----ALKELSDQAGSEMDSAEVRWVITVPAIWKQPAKQFMRQAAYKAGMATP 224

  Fly   168 ---NVLRIINEPTAAAI---------------------------AYGLDKQGTSERNVL------ 196
               ..|.|..||..|:|                           |..|.::....|..|      
 Frog   225 ENPEQLIIALEPEGASIYCRKLRLHQMIDLSSKAAINGISPTDPAKDLARRNRQSRTFLVENVIG 289

  Fly   197 -------------IFDLGGGTFDVSV--LTIEDGIFE--VKATAGDTHLGGEDFD-NRLV----- 238
                         :.|.||||.|::|  :.:.:|..:  .||:.|.....|.|:: .:|:     
 Frog   290 ELWSELEEGDRYVVVDCGGGTVDLTVHQIRLPEGHLKELYKASGGPYGSLGVDYEFEKLLCKIFG 354

  Fly   239 NHFVQEFQRKHKKDLGQNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYT-----SVT 298
            :.|:..|:.|       ...|...|..|.|..||..:......:.|...|..:|:|.     ||.
 Frog   355 DDFIDTFKVK-------RPAAWVDLMIAFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRGHSVE 412

  Fly   299 RARFE--------------ELNGD----LFRGTMEPVAKALRD--AKMDKGQIHDIVLVGGSTRI 343
            .|..:              .:|.|    ||:.|::|:.:.|.:  .|.:...:..:.||||....
 Frog   413 HALRKSNVDFVKWSSQGMLRMNPDAMNALFKPTIDPIIQHLTNLFQKPEVAGVKFLFLVGGFAES 477

  Fly   344 PKVQRLLQDFFNGKELNKSINPD-----------------------EAVAYGAAVQAAILHGDKS 385
            |.:|:.:|..| |.:....|..|                       ..:.||..|....:.|  .
 Frog   478 PLLQQAVQQAF-GDQCRVIIPHDVGLTILKGAVLFGLDPALIKVRRSPLTYGVGVLNRYVEG--K 539

  Fly   386 EAVQDLLLLDVT---------------PLSLGIETAGGVMTTLIKRNTTIPTKQTQIFTTYADNQ 435
            ...:.|||.|.|               .::|| ||        :||:.| |.||:|:.       
 Frog   540 HPPEKLLLKDGTRWCTDVFDKFILADQSVALG-ET--------VKRSYT-PAKQSQLI------- 587

  Fly   436 PGVLIQVFEGERAMTRDNNSL--------GKFELSAIPPAPRGVP---QVEVTFDIDANGILNVT 489
              ::|.::..|:   .|.|.:        |...|....|....||   :::.........| ..|
 Frog   588 --IIIHIYSSEQ---DDANFITDKGVRKCGTLRLDLTGPESAPVPSRREIQTIMQFGDTEI-KAT 646

  Fly   490 ALEKSTGKENRITI 503
            |::.:|.|..:::|
 Frog   647 AVDVATSKNVKVSI 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-1NP_524063.1 PTZ00009 1..641 CDD:240227 132/664 (20%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 100/514 (19%)
hspa12aXP_002941887.2 HSPA12A_like_NBD 54..513 CDD:212685 97/490 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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