DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ssp2 and Nxf2

DIOPT Version :9

Sequence 1:	NP_001287065.1	Gene:	ssp2 / 39540	FlyBaseID:	FBgn0036389	Length:	982	Species:	Drosophila melanogaster
Sequence 2:	NP_001276664.1	Gene:	Nxf2 / 83454	MGIID:	1933192	Length:	691	Species:	Mus musculus

Alignment Length:	87	Identity:	17/87 - (19%)
Similarity:	39/87 - (44%)	Gaps:	11/87 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly   455 CVMDLAEAEVEMLAQQGDEEQFENMLAELGKVNT-----LNEEQLKMQKSLDTIKRRFHRDEAEA 514
            |:|:     .|::.:....::.:.....|...:|     |:|||.:|.||. :::.....|.::.
Mouse   602 CIMN-----DELIVRNASPKEIQKAFTSLPAPDTSFKPLLSEEQQEMVKSF-SVQSGMKLDWSQK 660

  Fly   515 EEREEELQQSAAEKVDTPVLNQ 536
            ..::.|...:.|.:..|.:.|:
Mouse   661 CLQDNEWDYTKAGEAFTALQNE 682

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ssp2	NP_001287065.1	PHA03247	<676..965	CDD:223021
Nxf2	NP_001276664.1	Tap-RNA_bind	123..204	CDD:286271
		leucine-rich repeat	230..272	CDD:275382
		LRR_4	271..317	CDD:289563
		leucine-rich repeat	273..298	CDD:275382
		leucine-rich repeat	299..322	CDD:275382
		leucine-rich repeat	323..353	CDD:275382
		NTF2_like	451..606	CDD:298832	2/8 (25%)
		TAP_C	630..691	CDD:197882	13/54 (24%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3763
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900