Protein Alignment ssp2 and nxf1a

DIOPT Version :9

• Sequence 1: NP_001287065.1
• Gene: ssp2 / 39540
• FlyBaseID: FBgn0036389
• Length: 982
• Species: Drosophila melanogaster
• Sequence 2: XP_009306018.1
• Gene: nxf1a / 751719
• ZFINID: ZDB-GENE-060825-299
• Length: 642
• Species: Danio rerio
• Alignment Length: 580
• Identity: 99/580 - (17%)
• Similarity: 177/580 - (30%)
• Gaps: 265/580 - (45%)

  Fly   405 LNNTFEPVAKTAPFNGEKFVLDTMELL--------EQIEQPLDGT----------YNLQMSEQHR 451
            :|:.:.|     ||...:..|:.:|||        :..::.||.|          :|:.:....:
Zfish   216 MNSCYFP-----PFLKSELRLEDLELLKLCLSKRFDDSQKSLDLTSIRTDPELVSHNVDIILNRK 275

  Fly   452 Q-MQCVMDLAEAEV-EMLAQQGDEEQFENM--LAELGKVN--------TLNEEQLKMQKSLDTIK 504
            . ||.|:.:.:..: |:|:....:.:...:  |.||  ||        .|:..:||....||.:|
Zfish   276 NCMQAVIKIIQESIPELLSLNLSKNKLYKLDGLTEL--VNKAPNLQSLNLSCNELKSHCELDKVK 338

  Fly   505 ---------------RRFHRDEAEAEEREEELQQSAAEK--------------------VDT--- 531
                           .||         :::....||.:|                    |:|
Zfish   339 GFRLVELCLDGNPLCDRF---------KDQTTYISAVQKCFPRLLRLDGHVLSLPICFEVETSSN 394

  Fly   532 -PVLNQSHSSSNSSGGGGERLLSRRSRLYDDVN----LSAMHGSNGSSTSTNSASFIVQRRDMPQ 591
             |:...||..||...|..:|.|.:...:||..:    |.|.|         .||.|.:   .:|.
Zfish   395 IPLCKGSHFVSNEIQGLIQRFLEQYYSIYDSGDRQPLLEAYH---------ESACFSL---CLPS 447

  Fly   592 VEQPAPDPDPEPAEEPPKSQVTAEIDPASYKLPERRERDRDRFKTIKISKEMRLQPE-------- 648
            :.                       :|:.|||        |.||..:..|.::..|.
Zfish   448 IS-----------------------NPSRYKL--------DYFKNSRNVKNIKDSPTRFRLLKHT 481

  Fly   649 --IIVPCIDDEPQQLEDEQKQLVEDVRYEEDQRQGSPPGRLSRRDQTTAISNNADASASNYLTYK 711
              .:|.|:::.|:...|                             ..:|:.:.:|.||..|.:.
Zfish   482 RLTVVACLNELPKTQHD-----------------------------INSINVDVNAYASTLLAFT 517

  Fly   712 KPKEKSLIQRRPQQQEAPLLAEPAPASTLPQPRSLSRPRYISGLQK---------FTTVSKATSA 767
                                                    :||:.|         |...|:
Zfish   518 ----------------------------------------VSGVFKEVDDQSEDLFKAFSR---- 538

  Fly   768 GAGLNATPAAAMPTTVTVPANGNGELKSPMGIKSKSFHNLSSTMSGVGSGALPRPSLGGGLRRPS 832
                         ..|||||..:|     :.|.:......::||..: ..|...|:     :.||
Zfish   539 -------------VFVTVPAQNSG-----LCIVNDELFVRNTTMEEI-QCAFTTPT-----QSPS 579

  Fly   833 AQPSKLMS----------------GLRGPTQAQEDDSAVF-KVPKLVSGLRAPGLAPKRA 875
            :.|..::|                .|:...:..||::..| :..::.:.|:|.|:.|:.|
Zfish   580 SSPVPILSAYQQEMLSAFSQMSEMNLQWSQKCLEDNAWDFQQAAQIFAELQAHGMIPEAA 639

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssp2	NP_001287065.1	PHA03247	<676..965	CDD:223021	34/226 (15%)
nxf1a	XP_009306018.1	Tap-RNA_bind	142..223	CDD:286271	2/11 (18%)
		leucine-rich repeat	249..291	CDD:275382	7/41 (17%)
		LRR_4	290..336	CDD:289563	11/47 (23%)
		leucine-rich repeat	292..317	CDD:275382	6/26 (23%)
		leucine-rich repeat	318..341	CDD:275382	6/22 (27%)
		leucine-rich repeat	342..372	CDD:275382	5/38 (13%)
		NTF2	413..561	CDD:238403	41/281 (15%)
		TAP_C	579..641	CDD:197882	12/61 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3763
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900