Sequence 1: | NP_001287065.1 | Gene: | ssp2 / 39540 | FlyBaseID: | FBgn0036389 | Length: | 982 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_071335.1 | Gene: | NXF3 / 56000 | HGNCID: | 8073 | Length: | 531 | Species: | Homo sapiens |
Alignment Length: | 457 | Identity: | 88/457 - (19%) |
---|---|---|---|
Similarity: | 143/457 - (31%) | Gaps: | 168/457 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 351 STPLTTNMRSHCY---------HNNNNNNKAGYTP------TLKG------RGDMNLSPIVGATP 394
Fly 395 QKP-----TGTAP-GRLNNTFEPVAKTAPFN---GEKFVLDTMELLEQIEQPLDGTYNLQMSEQH 450
Fly 451 RQMQCVMDLAEAEVEMLAQQGDEEQFENMLAEL---------------GKVNTLNEEQLKMQKSL 500
Fly 501 DTIKRRFHRDEAEAEEREEELQQSAAEKVDTPVLNQSHSSSNSSGGGGERLLSRRSRLYDD-VNL 564
Fly 565 SAMHGSNGSSTSTNSASFIVQRRDMPQVEQPAPDPDP----EPAEE-PPKSQV-TAEIDPASYKL 623
Fly 624 PERRERDRDRFKTIKISKEMRLQPEIIVPCIDDE-------------------------PQQLED 663
Fly 664 EQKQLVED--VRYEEDQRQGSPPGRLSRRDQTTAIS-----NNADASASNYLTYKKPKEKSLIQR 721
Fly 722 RP 723 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ssp2 | NP_001287065.1 | PHA03247 | <676..965 | CDD:223021 | 12/53 (23%) |
NXF3 | NP_071335.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 33..59 | 5/24 (21%) | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 83..106 | 5/27 (19%) | |||
Tap-RNA_bind | 110..192 | CDD:312616 | 19/117 (16%) | ||
noncanonical RNP-type RNA-binding (RBD) domain | 115..192 | 17/112 (15%) | |||
leucine-rich repeat (LRR) domains | 193..329 | 37/174 (21%) | |||
leucine-rich repeat | 218..260 | CDD:275382 | 12/49 (24%) | ||
leucine-rich repeat | 275..305 | CDD:275382 | 9/46 (20%) | ||
nuclear transport factor 2 (NTF2)-like domain | 339..461 | 15/72 (21%) | |||
NTF2 | 341..496 | CDD:238403 | 15/70 (21%) | ||
ubiquitin-associated domain | 524..531 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3763 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |