DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ssp2 and nxf4

DIOPT Version :9

Sequence 1:	NP_001287065.1	Gene:	ssp2 / 39540	FlyBaseID:	FBgn0036389	Length:	982	Species:	Drosophila melanogaster
Sequence 2:	NP_731156.1	Gene:	nxf4 / 40884	FlyBaseID:	FBgn0051501	Length:	301	Species:	Drosophila melanogaster

Alignment Length:	166	Identity:	38/166 - (22%)
Similarity:	67/166 - (40%)	Gaps:	27/166 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly   478 NMLAELGKVNTLNEEQLKMQKSLD-TIKRRFHRDEAEAEE----REEELQQSAAEKVDTP----- 532
            |.:..|.....|.:....:::||| |:   |::|:|...|    .|.....:....||..
  Fly   131 NSILRLHLTMVLLDRYDPVERSLDLTL---FYKDKALCGEFFALAESNCMSTVLGIVDREMPELE 192

  Fly   533 --VLNQSHSSSNSSGGGGERLLSRRSRLYDDVNLSAMHGSNGSSTSTNSASFIVQRRDMPQVEQP 595
              :|:.:|.::.......||   |..||:   ::|..|....:..|..:..|: ...::..::.|
  Fly   193 RLILDGNHLTNLWVFRKVER---RFPRLH---SISLKHNDIENIYSLRNLQFL-PLAELNLLDNP 250

  Fly   596 AP-DPDPEPAEEPPKSQVTAEI----DPASYKLPER 626
            .| ..:.|..:..|..||..:|    |||..:|.||
  Fly   251 LPAGYEKEVLDIWPSLQVLNKIQVTPDPAMMQLVER 286

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ssp2	NP_001287065.1	PHA03247	<676..965	CDD:223021
nxf4	NP_731156.1	leucine-rich repeat	150..190	CDD:275382	11/42 (26%)
		LRR_4	189..235	CDD:289563	10/51 (20%)
		leucine-rich repeat	191..216	CDD:275382	5/27 (19%)
		leucine-rich repeat	217..240	CDD:275382	5/26 (19%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3763
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900