Protein Alignment ssp2 and nxf2

DIOPT Version :9

• Sequence 1: NP_001287065.1
• Gene: ssp2 / 39540
• FlyBaseID: FBgn0036389
• Length: 982
• Species: Drosophila melanogaster
• Sequence 2: NP_524111.3
• Gene: nxf2 / 39843
• FlyBaseID: FBgn0036640
• Length: 841
• Species: Drosophila melanogaster
• Alignment Length: 111
• Identity: 27/111 - (24%)
• Similarity: 37/111 - (33%)
• Gaps: 39/111 - (35%)

  Fly   530 DTPVLNQSHSSSNSSGGGGERLLSRRSR----LYDDVNL-------------SAMHGSNGSSTST 577
            :.|.....|.|....||    :|...||    .:|:.||             ..:|.:|.|.|:.
  Fly   706 EPPSTRNGHGSKTDIGG----VLLGFSRQFVVTFDEANLGLGKRARRLKIANERLHITNPSKTAI 766

  Fly   578 NSASFIVQRRDMPQVEQPAPDPDPEPAEEPPKSQVTAEIDPASYKL 623
            .:| |.|.          .|||....|||.       .:|...:||
  Fly   767 RNA-FSVN----------FPDPSERQAEED-------SLDVKDHKL 794

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssp2	NP_001287065.1	PHA03247	<676..965	CDD:223021
nxf2	NP_524111.3	leucine-rich repeat	434..474	CDD:275382
		leucine-rich repeat	475..500	CDD:275382
		leucine-rich repeat	501..524	CDD:275382
		leucine-rich repeat	525..555	CDD:275382
		TAP_C	779..841	CDD:197882	6/23 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3763
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900