Sequence 1: | NP_001287065.1 | Gene: | ssp2 / 39540 | FlyBaseID: | FBgn0036389 | Length: | 982 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008771632.1 | Gene: | Nxf3 / 302591 | RGDID: | 1564923 | Length: | 571 | Species: | Rattus norvegicus |
Alignment Length: | 328 | Identity: | 65/328 - (19%) |
---|---|---|---|
Similarity: | 119/328 - (36%) | Gaps: | 103/328 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 268 DTTFNLVDSLTTSALQSESESLPVDGNA---TFKRPTASATTADETQVLTGR--QMNTTFTDGCN 327
Fly 328 TPEGRCE------TPEN-----------IDRK--LALLTMESSTPLT------TNMRSHCYHNNN 367
Fly 368 NNNKAGYTPTLKGRGDMNLSPIVGATPQKPTGTAPGRLNNTFEPV--------AKTAPFNGEKFV 424
Fly 425 L----DTME-LLEQ----IEQPLDGTY--NLQMSEQHRQMQCVMDLAEAEVEMLAQQG------- 471
Fly 472 ------------------DEEQFENMLAEL-GKVNTLN-EEQLKM-------QKSLDTIKRRFHR 509
Fly 510 DEA 512 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ssp2 | NP_001287065.1 | PHA03247 | <676..965 | CDD:223021 | |
Nxf3 | XP_008771632.1 | Tap-RNA_bind | 104..186 | CDD:286271 | 15/98 (15%) |
leucine-rich repeat | 211..250 | CDD:275382 | 10/40 (25%) | ||
leucine-rich repeat | 269..298 | CDD:275382 | 4/28 (14%) | ||
NTF2_like | 333..488 | CDD:298832 | 0/1 (0%) | ||
TAP_C | 503..563 | CDD:197882 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3763 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |