DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ssp2 and Nxf3

DIOPT Version :9

Sequence 1:	NP_001287065.1	Gene:	ssp2 / 39540	FlyBaseID:	FBgn0036389	Length:	982	Species:	Drosophila melanogaster
Sequence 2:	XP_030107204.1	Gene:	Nxf3 / 245610	MGIID:	2685230	Length:	567	Species:	Mus musculus

Alignment Length:	321	Identity:	61/321 - (19%)
Similarity:	105/321 - (32%)	Gaps:	98/321 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly   101 VTTNMHKSFLQD---TSPP-----------SSICSSMNTERMNNSLIT---------------SA 136
            |:..:|.||.|.   ::||           .|....::.::.|.:.:.               ..
Mouse    31 VSDTVHTSFYQQPAMSNPPMHTRRYTPYGIPSRYQRVSVQKWNQTDVNMEGGSKPPERKMQRDKQ 95

  Fly   137 DFTNLNFLQSTI--GLEQDPN-LTTTLTNQTT-------------------DNMGIGGSIGGYTL 179
            |.|:.|:.:.||  |::.|.. |...:.:|.:                   ||..|...:  ..:
Mouse    96 DDTSENWFKVTIPFGIKYDKKWLLNLIQSQCSIPFTPVQFHYEKMQAHFFVDNPNIAFML--KAI 158

  Fly   180 SDMI---RDRKALESLTMCEDDGTLIKDSHIGQIDEISLTLSKTASGCSTMDNSTDSMSIPLAAD 241
            ||.|   .|.|....::.| |:...:.:..:.::|...||   |...|:|.....:...:|...|
Mouse   159 SDKILDETDNKISIFISPC-DEPHSVTELKLEKMDHTMLT---TNQQCATSQRVLNRQRLPFDQD 219

  Fly   242 -RTMPVVVSAV-----CPALQRTMILGEEMIGDTTFNLVDSLTTSALQSESESLPVDGNATFKRP 300
             .|.|..::.|     .|:|.   |..|:|              :.:.||.|...|..      |
Mouse   220 LMTRPTDLALVPRRYMTPSLS---IHKEDM--------------TQVNSEGEVAKVHA------P 261

  Fly   301 TASATTADETQVLTGRQMNTTFTDGCNTPEGRCETPENIDRKLALLTMESSTPLTTNMRSH 361
            ......||::      .::||..|..:......|.   ..:.|:|...||..|.......|
Mouse   262 DLEKICADQS------SLSTTMPDKSSNINSILEL---FPKLLSLDGQESHKPTLCGPEDH 313

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ssp2	NP_001287065.1	PHA03247	<676..965	CDD:223021
Nxf3	XP_030107204.1	Tap-RNA_bind	99..181	CDD:370331	17/84 (20%)
		leucine-rich repeat	206..244	CDD:275382	8/40 (20%)
		leucine-rich repeat	263..293	CDD:275382	6/38 (16%)
		NTF2_like	328..484	CDD:385413
		TAP_C	499..561	CDD:197882
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3763
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900