DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and CG18764

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_652712.2 Gene:CG18764 / 59239 FlyBaseID:FBgn0042205 Length:409 Species:Drosophila melanogaster


Alignment Length:469 Identity:113/469 - (24%)
Similarity:183/469 - (39%) Gaps:91/469 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 MGKNCRACAEHSSILVDLFSKEISDPPIWEMLNSI-LPEICRVKRD-EMPQKICPTCLVAAQNAF 79
            |...||.|   .||:.:...|.:......:||..| |.....:..| |:|..||..|.:....|.
  Fly     1 MALQCRTC---GSIIYNKMPKNLFHIENEKMLQDINLVTGTTLHNDPELPSSICACCTLDLNQAI 62

  Fly    80 HFRHKCEQSFQFFSQLLQLDKS----------NSNLSRSHCRRGTMNPLIPFEIVGCEDPLDTNV 134
            .||.:|..:.:   ||:...:|          ....|...|.......:..:.:...|:.||   
  Fly    63 LFRERCILTQK---QLVHRRRSPEAKEPAEDVEEMASPPDCLNDPFGEVDEYIVESPEEVLD--- 121

  Fly   135 TKLDANRPDVKTDIDEPTDGKATNGQESEPLQEVFEITMNDIKTEDEV--SIQETFED-AFDEEN 196
                 :..|...|:||  |....:.::.:.||::.|:...|.:..:.:  |:|:..|. ..|:.|
  Fly   122 -----HDSDAHHDLDE--DNYIDSVEDVDALQDMAEVAEEDSQDVESLISSVQKELESICNDDSN 179

  Fly   197 DNNNTDSEREDSDQW--TVGSTEDQDEPWIPGGGGRQTVGGNNQSLLCTECGVSYSTQKALARHV 259
            .:||...|.::...:  |:...|....|              |..|..::.....||:.|..:  
  Fly   180 SDNNDYMEPQNGSYFNETINEYEVSSNP--------------NTPLPESKSAAGRSTKPATTK-- 228

  Fly   260 AKHKEQGDTQKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDE 324
            .|.|:|..|.|.          .|..|:...:|.   :|..:|                      
  Fly   229 PKRKKQYVTWKN----------MTEEQIIERKRL---QRKREC---------------------- 258

  Fly   325 EKGHKCPQCDKTFYTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGLKLHSR-LHKEERPFKCEL 388
                .|.||.:.|..:.|.:.|:.||||.:.:.|..|.:.|..:..:.||.| :|:.|:|:.|..
  Fly   259 ----VCEQCGRQFTDQSNFKLHMLRHTGNKNFACQQCGKRFYTDHLMTLHQRIIHQGEKPYDCRF 319

  Fly   389 CGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNH 453
            |.|.|..:...:.|.|.|...:.:.|..|||.|...|...:|:..|:|::.|.|..|.|:|..|.
  Fly   320 CTKSFHNSNTRLIHERTHTNAKPYSCHHCDKCFKSASGRKRHELIHTGVRAFACTICKQSFQRNT 384

  Fly   454 HLKSHLR--IHTGE 465
            |||:|||  .||.:
  Fly   385 HLKAHLRSKFHTAK 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262 20/76 (26%)
C2H2 Zn finger 242..262 CDD:275368 3/19 (16%)
C2H2 Zn finger 274..294 CDD:275368 3/19 (16%)
SFP1 <296..374 CDD:227516 15/77 (19%)
COG5048 <299..486 CDD:227381 50/170 (29%)
C2H2 Zn finger 302..322 CDD:275368 1/19 (5%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
C2H2 Zn finger 358..378 CDD:275368 6/20 (30%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)
COG5048 <395..583 CDD:227381 26/73 (36%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
C2H2 Zn finger 442..462 CDD:275368 11/21 (52%)
C2H2 Zn finger 470..486 CDD:275368
C2H2 Zn finger 500..520 CDD:275368
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
CG18764NP_652712.2 zf-AD 4..75 CDD:214871 20/76 (26%)
C2H2 Zn finger 260..280 CDD:275368 6/19 (32%)
zf-H2C2_2 272..297 CDD:463886 9/24 (38%)
C2H2 Zn finger 288..309 CDD:275368 6/20 (30%)
C2H2 Zn finger 317..337 CDD:275368 6/19 (32%)
zf-H2C2_2 333..354 CDD:463886 8/20 (40%)
C2H2 Zn finger 345..365 CDD:275368 7/19 (37%)
C2H2 Zn finger 373..391 CDD:275368 9/17 (53%)
Blue background indicates that the domain is not in the aligned region.

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