DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and zgc:174315

DIOPT Version :9

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001107917.1 Gene:zgc:174315 / 571611 ZFINID:ZDB-GENE-080219-29 Length:250 Species:Danio rerio


Alignment Length:266 Identity:85/266 - (31%)
Similarity:127/266 - (47%) Gaps:28/266 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 IKTEDE-VSIQETFEDAFDEENDNNNTDSEREDSDQWTVGSTEDQDEPWIPGGGGRQTVGGNNQS 239
            ||.|.| |.|:||.....::..:..:....::::.||.....:.|.|              ..|.
Zfish     4 IKEESEDVKIEETIRVKHEDLQEQTDLMVMKKETHQWNELEKKQQFE--------------KPQE 54

  Fly   240 LLCTECGVSYSTQKALARHVAKHKEQGDTQKPHLCDF----CGRGFRTNAQLTTHRRRHTGERPF 300
            :...|       :..|.:..:.|:....::.  .|:|    ||..|.....|..|.|.|||||||
Zfish    55 ITTDE-------KPTLTKKTSSHRRPRKSKS--ACNFTCRQCGNCFSRKRTLEVHMRIHTGERPF 110

  Fly   301 KCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFYTRGNLRAHIQRHTGERPYKCPDCPQTF 365
            .|..|.|:|:.......||..|..|:.:.|.||.|:||..|||..|::.||||:||.|..|.::|
Zfish   111 TCKECGKSYSQKSNFNVHMRVHTGERPYSCQQCGKSFYNTGNLAVHMRIHTGEKPYSCHQCGRSF 175

  Fly   366 AKNSGLKLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKH 430
            .:|..|::|.|.|..|:||.|..||:||:....|..|:..|:.::.|.|..|.|||..|:::|.|
Zfish   176 NQNGTLEIHMRTHTGEKPFICTECGEGFICQSALNYHMISHSREKPFPCDQCGKSFICKASLMNH 240

  Fly   431 QRTHSG 436
            ...|:|
Zfish   241 MNGHTG 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 21..95 CDD:285071
C2H2 Zn finger 242..262 CDD:275368 2/19 (11%)
C2H2 Zn finger 274..294 CDD:275368 8/23 (35%)
zf-H2C2_2 287..311 CDD:290200 14/23 (61%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
C2H2 Zn finger 330..350 CDD:275368 10/19 (53%)
zf-H2C2_2 342..366 CDD:290200 11/23 (48%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
COG5048 <395..583 CDD:227381 14/42 (33%)
zf-C2H2 412..434 CDD:278523 9/21 (43%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
zf-H2C2_2 426..451 CDD:290200 4/11 (36%)
C2H2 Zn finger 442..462 CDD:275368
zf-H2C2_2 454..478 CDD:290200
C2H2 Zn finger 470..486 CDD:275368
C2H2 Zn finger 500..520 CDD:275368
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
zgc:174315NP_001107917.1 C2H2 Zn finger 84..104 CDD:275368 6/19 (32%)
zf-H2C2_2 97..121 CDD:290200 14/23 (61%)
C2H2 Zn finger 112..132 CDD:275368 6/19 (32%)
zf-H2C2_2 124..147 CDD:290200 8/22 (36%)
COG5048 136..>227 CDD:227381 37/90 (41%)
C2H2 Zn finger 140..160 CDD:275368 10/19 (53%)
zf-H2C2_2 152..177 CDD:290200 12/24 (50%)
C2H2 Zn finger 168..188 CDD:275368 7/19 (37%)
zf-H2C2_2 181..203 CDD:290200 10/21 (48%)
C2H2 Zn finger 196..216 CDD:275368 7/19 (37%)
zf-H2C2_2 208..231 CDD:290200 7/22 (32%)
C2H2 Zn finger 224..244 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100488
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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