DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and znf989

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001018578.1 Gene:znf989 / 553777 ZFINID:ZDB-GENE-050522-337 Length:381 Species:Danio rerio


Alignment Length:424 Identity:148/424 - (34%)
Similarity:208/424 - (49%) Gaps:55/424 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 QESEPL--QEVFEITMNDIKTEDEVSI-QETFEDAFDEENDNNNTDSEREDSDQWTVGSTEDQDE 221
            :|||.|  ::.|.:...|.:.:.|:.: :|.|:|.    |:...:..||.........||..:..
Zfish     6 EESEDLKIEDTFSVKHEDPEEQTELMVLKEEFQDL----NEMEESQCERHQDLTTDEKSTPKKSL 66

  Fly   222 PWIPGGGGRQTVGGNNQSLLCTECGVSYSTQKALARHVAKHKEQGDTQKPHLCDFCGRGFRTNAQ 286
            |       .:.|..||  ..|..||..:|.:.:|..|:..|  .||  |...||.||:.|...::
Zfish    67 P-------HKRVQKNN--FTCCVCGKCFSQRHSLKVHMRIH--TGD--KLFTCDQCGKSFTQKSK 118

  Fly   287 LTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFYTRGNLRAHIQRHT 351
            :..|.|.||.||.:.||.|.|.:.....||.||..|..||...|.||.|.|.....|::|...|:
Zfish   119 IDVHMRVHTSERHYSCPQCAKGFRQKQHLKLHMRIHSGEKPFPCNQCGKRFNQLQALQSHFTIHS 183

  Fly   352 GERPYKCPDCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKCPD 416
            |||||.|..|.::|.:...|:.|.::|..|:||.|..||.||.|.:.|..|:|:|.|::.|.||.
Zfish   184 GERPYACTQCEKSFRQRPSLEKHLKVHSREKPFTCSQCGNGFTQKERLQNHMRIHTGEKPFACPH 248

  Fly   417 CDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKCDQCGKGFSANQ 481
            |:|:|..:||:..|.|||||.|||.|..||::|...:.|..|:|.||||||:.||||||.||...
Zfish   249 CEKTFAHRSNLYFHVRTHSGEKPFVCTHCGKSFRCKNSLVGHMRTHTGEKPFACDQCGKSFSREF 313

  Fly   482 SLMKHTLWHVDNNDRPFKCSQCPKAYDTQQSLRGHEKTHKNPDEPKTLHQCPHCDVRFALKKTLD 546
            :|..|...|  ..::|:.|.||.|::..:.||..||..|.     |.:: |.||...|       
Zfish   314 NLKCHMSNH--TGEKPYTCGQCGKSFVRKDSLNRHELIHS-----KGIN-CHHCGKSF------- 363

  Fly   547 KHITSHKIRPHPCPQCPEGFFSQKSLKKHLRLHN 580
                :||                .|.|.|:|||:
Zfish   364 ----NHK----------------TSFKSHMRLHS 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262
C2H2 Zn finger 242..262 CDD:275368 6/19 (32%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
SFP1 <296..374 CDD:227516 30/77 (39%)
COG5048 <299..486 CDD:227381 83/186 (45%)
C2H2 Zn finger 302..322 CDD:275368 8/19 (42%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
C2H2 Zn finger 358..378 CDD:275368 5/19 (26%)
C2H2 Zn finger 386..406 CDD:275368 9/19 (47%)
COG5048 <395..583 CDD:227381 70/186 (38%)
C2H2 Zn finger 414..434 CDD:275368 9/19 (47%)
C2H2 Zn finger 442..462 CDD:275368 7/19 (37%)
C2H2 Zn finger 470..486 CDD:275368 9/15 (60%)
C2H2 Zn finger 500..520 CDD:275368 8/19 (42%)
C2H2 Zn finger 532..552 CDD:275370 4/19 (21%)
C2H2 Zn finger 559..579 CDD:275370 4/19 (21%)
znf989NP_001018578.1 C2H2 Zn finger 78..98 CDD:275368 6/19 (32%)
zf-H2C2_2 90..115 CDD:463886 11/28 (39%)
C2H2 Zn finger 106..126 CDD:275368 7/19 (37%)
C2H2 Zn finger 134..154 CDD:275368 8/19 (42%)
COG5048 <149..377 CDD:227381 101/262 (39%)
C2H2 Zn finger 162..182 CDD:275368 7/19 (37%)
C2H2 Zn finger 190..210 CDD:275368 5/19 (26%)
C2H2 Zn finger 218..238 CDD:275368 9/19 (47%)
C2H2 Zn finger 246..266 CDD:275368 9/19 (47%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
C2H2 Zn finger 302..322 CDD:275368 10/19 (53%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
C2H2 Zn finger 356..376 CDD:275368 10/46 (22%)
Blue background indicates that the domain is not in the aligned region.

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