DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and znf333

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001015978.1 Gene:znf333 / 548732 XenbaseID:XB-GENE-1015481 Length:336 Species:Xenopus tropicalis


Alignment Length:279 Identity:104/279 - (37%)
Similarity:149/279 - (53%) Gaps:17/279 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 CTECGVSYSTQKALARHVAKHKEQGDTQKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCP 306
            |::|     |.:..|         ..::|.:||..|.:.|..:.:||.|:|.||||||:.|..|.
 Frog    74 CSDC-----TLRLRA---------SSSRKQYLCHDCEKSFSDSFRLTIHQRSHTGERPYVCTDCG 124

  Fly   307 KAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFYTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGL 371
            |::|....|.:|..||..::.:.||.|.|.|..|.:|..|.:.|||||||.|.||.:|||.:|.|
 Frog   125 KSFTQSSNLITHRRTHTGQRPYTCPDCGKNFIQRTHLVLHQRSHTGERPYGCSDCGKTFAHSSRL 189

  Fly   372 KLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSG 436
            .:|.|:|..|:|:.|..|||||.....|::|..:|..|..:.|.||.|||.......:||:.|:.
 Frog   190 VIHKRIHTGEKPYVCGECGKGFKSKTQLVSHRVLHTEDMLYICTDCGKSFSNHLTFARHQKNHTV 254

  Fly   437 IKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKCDQCGKGFSANQSLMKHTLWHVDNNDRPFKCS 501
            .:|..|:||.::|:|...|..|.|.||||:||.|.:||..::.|..|:.|...|   ......|.
 Frog   255 KRPHACQECSKSFTHISLLVMHQRTHTGERPYVCTECGSTYTRNSHLVAHQRTH---TVMAHMCG 316

  Fly   502 QCPKAYDTQQSLRGHEKTH 520
            .|.||:..:.||..|.:.|
 Frog   317 DCGKAFTDRSSLMIHRRNH 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262
C2H2 Zn finger 242..262 CDD:275368 4/19 (21%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
SFP1 <296..374 CDD:227516 35/77 (45%)
COG5048 <299..486 CDD:227381 76/186 (41%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
C2H2 Zn finger 358..378 CDD:275368 10/19 (53%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
COG5048 <395..583 CDD:227381 43/126 (34%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
C2H2 Zn finger 442..462 CDD:275368 8/19 (42%)
C2H2 Zn finger 470..486 CDD:275368 5/15 (33%)
C2H2 Zn finger 500..520 CDD:275368 7/19 (37%)
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
znf333NP_001015978.1 SFP1 <62..193 CDD:227516 50/132 (38%)
C2H2 Zn finger 92..112 CDD:275368 7/19 (37%)
zf-C2H2 118..140 CDD:395048 6/21 (29%)
C2H2 Zn finger 120..140 CDD:275368 6/19 (32%)
C2H2 Zn finger 148..168 CDD:275368 8/19 (42%)
C2H2 Zn finger 176..196 CDD:275368 10/19 (53%)
zf-H2C2_2 188..213 CDD:463886 12/24 (50%)
C2H2 Zn finger 204..224 CDD:275368 8/19 (42%)
C2H2 Zn finger 232..252 CDD:275368 8/19 (42%)
COG5048 255..>309 CDD:227381 22/56 (39%)
C2H2 Zn finger 260..280 CDD:275368 8/19 (42%)
C2H2 Zn finger 288..308 CDD:275368 6/19 (32%)
C2H2 Zn finger 315..335 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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