DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and CG4854

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster


Alignment Length:454 Identity:101/454 - (22%)
Similarity:157/454 - (34%) Gaps:156/454 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MERSVDASMGKNCRAC---AEHSSIL---VDLFSK-------EISDPPIWEMLNSILPEICRVKR 60
            |..:|| |....||.|   .:..|::   .|...|       |:|:.|.|               
  Fly     1 MHTNVD-SRDLKCRICLVQPKDESLMPTEPDFPDKIKRCTGVELSESPDW--------------- 49

  Fly    61 DEMPQKICPTCLVAAQNAFHFRHKCEQSFQFFSQLLQLDKSNSNLSRSHCRRGTMNPLIPFEIVG 125
               |.:||.:|.:..:.|...|..|:|:                                     
  Fly    50 ---PNRICTSCALLLRAALKLRSLCQQT------------------------------------- 74

  Fly   126 CEDPLDTNVTKLDANRPDVKTDIDEPTDGKATNGQESEPLQEV-FEITMNDIKTEDEVSIQETFE 189
                               :.|:.|            :.|||: .||..::.:|:.:...::.  
  Fly    75 -------------------EKDLKE------------QKLQEINIEIVHDEQETKKKTESRDL-- 106

  Fly   190 DAFDEENDNNNTDSERE----DSDQWTVGSTEDQDEPWIPGGGGRQTVGGNNQSLLCTECGVSYS 250
                .:|:...:|||.|    ||...|:.|:||              |..:...|:..|..:|..
  Fly   107 ----SKNEATGSDSELEYEYLDSYDVTLESSED--------------VACSADELVSIEPAISAP 153

  Fly   251 TQKALA---RHVAKHKEQGDTQKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHG 312
            .:...:   :.|....|.........|:.|...:....:||.|.:.|:.::|.:|.:|.|.:...
  Fly   154 EESVYSLSPKPVTFEDEDSGQAASFTCNICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQT 218

  Fly   313 PTLKSHMHTHDEEKGHKCPQCDKTFYTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGLKLHSRL 377
            |.|..||:|                            |||.|||||..|...||..|....|.|:
  Fly   219 PQLARHMNT----------------------------HTGNRPYKCDYCDSRFADPSTRIKHQRI 255

  Fly   378 HKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSGIKPFK 441
            |..|||:|||.|.:.|..:..|..||:.|.|:|.|.|..|.|||.:..:...|:::|...|..|
  Fly   256 HTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEKSHKRTKEVK 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262 18/87 (21%)
C2H2 Zn finger 242..262 CDD:275368 3/22 (14%)
C2H2 Zn finger 274..294 CDD:275368 5/19 (26%)
SFP1 <296..374 CDD:227516 21/77 (27%)
COG5048 <299..486 CDD:227381 48/143 (34%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..350 CDD:275368 0/19 (0%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
COG5048 <395..583 CDD:227381 16/47 (34%)
C2H2 Zn finger 414..434 CDD:275368 6/19 (32%)
C2H2 Zn finger 442..462 CDD:275368 101/454 (22%)
C2H2 Zn finger 470..486 CDD:275368
C2H2 Zn finger 500..520 CDD:275368
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
CG4854NP_650860.1 zf-AD 12..>57 CDD:214871 13/62 (21%)
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
COG5048 201..>258 CDD:227381 24/84 (29%)
C2H2 Zn finger 208..228 CDD:275368 8/47 (17%)
zf-H2C2_2 221..244 CDD:463886 13/50 (26%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
zf-H2C2_2 251..271 CDD:463886 10/19 (53%)
C2H2 Zn finger 264..284 CDD:275368 7/19 (37%)
C2H2 Zn finger 292..312 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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