DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and CG4424

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:425 Identity:102/425 - (24%)
Similarity:156/425 - (36%) Gaps:119/425 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 CRACAEHSSI-LVDLFSKEISDPP----IWEMLNSI--LPEICRVKRDEMPQKICPTCLVAAQNA 78
            ||.|.:.... :|.:|.......|    :.:.:.|:  :......|.:.:|.:||..|......|
  Fly    11 CRTCLQDGEAHMVSIFQTADDRLPGGVSLCDKIESLSGIQIRATAKEEVLPTRICLRCKAFLTLA 75

  Fly    79 FHFRHKCEQSFQFFSQLLQLDKSNSNLSRSHCRRGTMNPLIPFEIVGCEDPLDTNVTKLDANRPD 143
            ..||..|::|.:|..:.:..|.....:.:              |:|....|         :..|.
  Fly    76 HKFRQICQRSNEFLREYVIKDAVEQGVVK--------------EVVQQTRP---------STPPP 117

  Fly   144 VKTDIDEPTDGKATNGQESEPLQE-VFEITMNDIKTEDEVSIQETFEDAFDEENDNNNTDSERED 207
            ::|:..||        .|.|.|:| |:       .|||.:           ||..:...:.||. 
  Fly   118 IETEQLEP--------PEDEVLEEGVW-------STEDPI-----------EETPHGPAEKERP- 155

  Fly   208 SDQWTVGSTEDQDEPWIPGGGGRQTVGGNNQSLLCTECGVSYSTQKALARHVAKHKEQGDTQKPH 272
                ||.:.|....|:.|..                      ||.........|       .|.|
  Fly   156 ----TVLTVEMLPAPYPPPA----------------------STPPPAPAGAVK-------GKLH 187

  Fly   273 LCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQCDKTF 337
            :|..||.|:...:.|.||.|||..|||::|.:                            |.|:|
  Fly   188 VCAICGNGYPRKSTLDTHMRRHNDERPYECEI----------------------------CHKSF 224

  Fly   338 YTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGFVQNQHLITH 402
            :....|:.||::|||.:||.|..|.:.||..:.|..|.|.|:.|||:.|:.|||.|.....|..|
  Fly   225 HVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMH 289

  Fly   403 LRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSGI 437
            .:.|.|::...|..|:|||....|::.|.:|...|
  Fly   290 YKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHI 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262 18/80 (23%)
C2H2 Zn finger 242..262 CDD:275368 2/19 (11%)
C2H2 Zn finger 274..294 CDD:275368 8/19 (42%)
SFP1 <296..374 CDD:227516 20/77 (26%)
COG5048 <299..486 CDD:227381 42/139 (30%)
C2H2 Zn finger 302..322 CDD:275368 1/19 (5%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
COG5048 <395..583 CDD:227381 13/43 (30%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
C2H2 Zn finger 442..462 CDD:275368
C2H2 Zn finger 470..486 CDD:275368
C2H2 Zn finger 500..520 CDD:275368
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
CG4424NP_650859.3 zf-AD 10..92 CDD:462262 18/80 (23%)
C2H2 Zn finger 189..209 CDD:275368 8/19 (42%)
COG5048 210..>345 CDD:227381 44/143 (31%)
C2H2 Zn finger 217..237 CDD:275368 7/47 (15%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
C2H2 Zn finger 301..320 CDD:275368 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.

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