DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and CG5245

DIOPT Version :9

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster


Alignment Length:337 Identity:125/337 - (37%)
Similarity:181/337 - (53%) Gaps:12/337 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 CTECGVSYSTQKALARHVAKHKEQGDTQKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCP 306
            ||:|..|::.:..|..|:..|.|    ::|..|..|.:.|:.|:.|..|.|.|...|||||..|.
  Fly   167 CTQCSTSFARKSHLQVHLRTHSE----ERPFECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCS 227

  Fly   307 KAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFYTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGL 371
            |::.....|:.|:.|| .|:..||.||.|||....:|:.|::.|.||.|:|||.|.:|||:||.|
  Fly   228 KSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQNDSLQIHLRVHAGEDPFKCPHCSETFARNSRL 291

  Fly   372 KLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSG 436
            :||...|..:.|.||..|...|........|:|:|..:||:||.:|.||||:||::::||:.|:|
  Fly   292 QLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAECSKSFFKKSHLVEHQQVHTG 356

  Fly   437 IKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKCDQCGKGFSANQSLMKHTLWHVDNNDRPFKCS 501
            .:||||..|.:.|....||:.|:..|.|||..||..|.|.|..:..|:.|...|...|.  |:|.
  Fly   357 ERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFKLSSQLLVHLQEHTGKNQ--FECP 419

  Fly   502 QCPKAYDTQQSLRGHEKTHKNPDEPKTLHQCPHCDVRFALKKTLDKHITSHK-IRPHPCPQCPEG 565
            .|.|:|.|..:|..|.:||..    :...:|.||...||......:|:.:|. .:|:.|..|...
  Fly   420 HCSKSYTTSSTLHMHLRTHTG----ELPFKCSHCSKLFARSAEHQEHLRTHTGEKPYKCSHCSTR 480

  Fly   566 FFSQKSLKKHLR 577
            :..:.||.:|||
  Fly   481 YTQKSSLGRHLR 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 21..95 CDD:285071
C2H2 Zn finger 242..262 CDD:275368 6/19 (32%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
zf-H2C2_2 287..311 CDD:290200 11/23 (48%)
C2H2 Zn finger 302..322 CDD:275368 5/19 (26%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
zf-H2C2_2 342..366 CDD:290200 11/23 (48%)
C2H2 Zn finger 358..378 CDD:275368 11/19 (58%)
C2H2 Zn finger 386..406 CDD:275368 5/19 (26%)
COG5048 <395..583 CDD:227381 65/184 (35%)
zf-C2H2 412..434 CDD:278523 11/21 (52%)
C2H2 Zn finger 414..434 CDD:275368 10/19 (53%)
zf-H2C2_2 426..451 CDD:290200 10/24 (42%)
C2H2 Zn finger 442..462 CDD:275368 6/19 (32%)
zf-H2C2_2 454..478 CDD:290200 11/23 (48%)
C2H2 Zn finger 470..486 CDD:275368 5/15 (33%)
C2H2 Zn finger 500..520 CDD:275368 7/19 (37%)
C2H2 Zn finger 532..552 CDD:275370 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275370 7/19 (37%)
CG5245NP_650197.1 COG5048 74..478 CDD:227381 119/321 (37%)
C2H2 Zn finger 84..104 CDD:275368
C2H2 Zn finger 112..132 CDD:275368
C2H2 Zn finger 139..159 CDD:275368
C2H2 Zn finger 167..187 CDD:275368 6/19 (32%)
zf-H2C2_2 179..204 CDD:290200 8/28 (29%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
C2H2 Zn finger 223..243 CDD:275368 5/19 (26%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 278..298 CDD:275368 11/19 (58%)
C2H2 Zn finger 306..326 CDD:275368 5/19 (26%)
C2H2 Zn finger 334..354 CDD:275368 10/19 (53%)
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..492 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440478
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D42822at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24377
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.090

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