DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and Zfp950

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001296145.1 Gene:Zfp950 / 414758 MGIID:2652824 Length:609 Species:Mus musculus


Alignment Length:343 Identity:133/343 - (38%)
Similarity:203/343 - (59%) Gaps:11/343 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 CTECGVSYSTQKALARHVAKHKEQGDTQKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCP 306
            |.:||.:::....|  |:.|.|..|  :||:.|:.||:.|.....|..|:|.||||:|::|..|.
Mouse   245 CNQCGKAFAHDSNL--HIHKRKHAG--EKPYECNQCGKAFPCYNLLQIHKRTHTGEKPYECNQCG 305

  Fly   307 KAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFYTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGL 371
            |.:.:...|:.|...|..||.::|..|.|.|....:||.|.:.||||:||:|..|.:.|..:|.|
Mouse   306 KTFAYHSYLQMHERIHTGEKPYECNHCGKAFSQHSSLRVHKRTHTGEKPYECNQCGEAFVYHSHL 370

  Fly   372 KLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSG 436
            ::|..:|..|:||:|..|.|.||.|.||:.|.|:|.|::.::|..|.|:|.:.|.:..|:|||:|
Mouse   371 QIHKTMHTGEKPFQCNQCDKAFVYNNHLLVHKRIHTGEKPYECNHCGKAFSQLSGLHVHKRTHTG 435

  Fly   437 IKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKCDQCGKGFSANQSLMKHTLWHVDNNDRPFKCS 501
            .||:||.|||:||:.|.||:.|.||||||||::|:||||.|:.:.:|..|...|.  .::|::|:
Mouse   436 EKPYKCNECGKAFARNSHLQRHKRIHTGEKPHECNQCGKAFARHSTLQVHKRKHA--GEKPYECN 498

  Fly   502 QCPKAYDTQQSLRGHEKTHKNPDEPKTLHQCPHCDVRFALKKTLDKHITSHK-IRPHPCPQCPEG 565
            ||.||:.:...|..|::||.. ::|   ::|..|...||....|..|...|. .:|:.|.||.:.
Mouse   499 QCGKAFPSHNLLHIHKRTHTG-EKP---YECNQCGKTFAYHSHLQVHGRIHTGEKPYKCNQCGKA 559

  Fly   566 FFSQKSLKKHLRLHNLKK 583
            |...::|:.|.|.|..:|
Mouse   560 FACHRNLRVHKRKHTGEK 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262
C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
SFP1 <296..374 CDD:227516 29/77 (38%)
COG5048 <299..486 CDD:227381 82/186 (44%)
C2H2 Zn finger 302..322 CDD:275368 5/19 (26%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
C2H2 Zn finger 386..406 CDD:275368 10/19 (53%)
COG5048 <395..583 CDD:227381 74/188 (39%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
C2H2 Zn finger 442..462 CDD:275368 11/19 (58%)
C2H2 Zn finger 470..486 CDD:275368 7/15 (47%)
C2H2 Zn finger 500..520 CDD:275368 7/19 (37%)
C2H2 Zn finger 532..552 CDD:275370 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275370 7/19 (37%)
Zfp950NP_001296145.1 KRAB 4..44 CDD:460171
C2H2 Zn finger 78..97 CDD:275368
COG5048 101..514 CDD:227381 112/274 (41%)
C2H2 Zn finger 105..125 CDD:275368
C2H2 Zn finger 133..153 CDD:275368
C2H2 Zn finger 161..181 CDD:275368
C2H2 Zn finger 189..209 CDD:275368
C2H2 Zn finger 217..237 CDD:275368
C2H2 Zn finger 245..265 CDD:275368 6/21 (29%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
C2H2 Zn finger 301..321 CDD:275368 5/19 (26%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
C2H2 Zn finger 385..405 CDD:275368 10/19 (53%)
C2H2 Zn finger 413..433 CDD:275368 7/19 (37%)
C2H2 Zn finger 441..461 CDD:275368 11/19 (58%)
C2H2 Zn finger 469..489 CDD:275368 8/19 (42%)
C2H2 Zn finger 497..517 CDD:275368 7/19 (37%)
C2H2 Zn finger 525..545 CDD:275368 6/19 (32%)
C2H2 Zn finger 553..573 CDD:275368 7/19 (37%)
C2H2 Zn finger 581..601 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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