DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Meics and CG3281

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster


Alignment Length:614 Identity:141/614 - (22%)
Similarity:223/614 - (36%) Gaps:151/614 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KNCRACAE--------HSSILVDLFSKEISDPPIWEMLNSILPEICRVKRDEMPQKICPTCLVAA 75
            :.||.|.|        |..|..:....|     :|::|.::...........:|..:|..|....
  Fly    13 QTCRVCLETHETNLYVHDEIKYNDLKLE-----LWQLLEAVSKLKWTWTDPNLPMHLCQNCARRL 72

  Fly    76 QNAFHFRHKCEQSFQFFSQLLQLDKSNSNLSRSHCRRGTMNPLIPFEIVGCEDPLDTNVTKLDAN 140
            ..|:.|..:.|.:.:....|.:..                      |:....|.:..:|.:|   
  Fly    73 IGAYEFIVEVENAHETLQNLFEQQ----------------------EVAAKPDEVHVDVVEL--- 112

  Fly   141 RPDVKTDIDEPTDGKATNGQESEPLQEVFEITMNDIKTEDEVSIQETFED----AFDEE------ 195
                   ||:  |...:..|.   |...|        .|..|.::|.:.|    ||..:      
  Fly   113 -------IDQ--DDVVSMAQY---LSTSF--------AEQHVEMEEKYGDQDCSAFTSDVGEEPL 157

  Fly   196 NDNNNTDSEREDSDQWTVGSTE-DQDEPWIPGGGGRQTVGGNNQSLLCTECGVSYSTQKALARHV 259
            ..:.:.|.|.|||.|......| :..|...|...|.:.....|....|..|...::..::|.||.
  Fly   158 YASEDRDDEPEDSFQLKPRPDEIENRELSRPSQLGSRLNHSANFIYKCAVCPRVFAKSESLTRHF 222

  Fly   260 AK-HKEQGDTQKPHLC-DFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHM--- 319
            :: ||...|.....|. :.||.|..|                  |..||:.:....||:.||   
  Fly   223 SQAHKLTADVAAMKLANESCGTGLLT------------------CEHCPRTFKRQDTLRRHMQAF 269

  Fly   320 ----------HTHDEE------KGHKCPQCDKTFYTRGNLRAHIQRHTGERPYKCPDCPQTFAKN 368
                      .|.|..      |...||.|..:|.. .:|..||:||||:.||||..|.:.|.::
  Fly   270 HPDAIALEPEETTDNSARKRIAKRRDCPHCGLSFPV-SSLTIHIRRHTGDNPYKCDQCEKAFPRS 333

  Fly   369 SGLKLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRT 433
            ..|.||.|.|..|||.:|::|.|.|:....|..|:|:|.|.|.:.|..|.|||.:.:::..|.|.
  Fly   334 QDLSLHMRQHTGERPSECKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMRR 398

  Fly   434 HSGIKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKC-----DQCGKGFSA------------NQ 481
            |:|.:|::|..||::|.    ..|||.||...|.:..     ::....|:|            ::
  Fly   399 HTGERPYQCGVCGESFV----CGSHLNIHRNRKGHLIAVIPGNEVEANFAADPYVNARVNQRRSE 459

  Fly   482 SLMKHTLWHVDNNDRPFKCSQCPKAYDTQQSLRGHEKTHKNPDEPKTLHQCPHCDVRFALKKTLD 546
            .:.:..|..:..|....:....||                 ||.|...::|..|:.:|.....|.
  Fly   460 DIERMRLQRIPENQLQQRLENLPK-----------------PDVPAMCYKCGVCEQKFKSGALLT 507

  Fly   547 KHITSHKIRPHPCPQCPEGFF--SQKSLK 573
            .|  .:|:..:...:..|..|  :||.:|
  Fly   508 VH--RNKMSHYEIERVYENPFGKNQKIIK 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262 15/82 (18%)
C2H2 Zn finger 242..262 CDD:275368 5/20 (25%)
C2H2 Zn finger 274..294 CDD:275368 4/20 (20%)
SFP1 <296..374 CDD:227516 28/96 (29%)
COG5048 <299..486 CDD:227381 67/222 (30%)
C2H2 Zn finger 302..322 CDD:275368 7/32 (22%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
COG5048 <395..583 CDD:227381 46/198 (23%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
C2H2 Zn finger 442..462 CDD:275368 7/19 (37%)
C2H2 Zn finger 470..486 CDD:275368 2/32 (6%)
C2H2 Zn finger 500..520 CDD:275368 2/19 (11%)
C2H2 Zn finger 532..552 CDD:275370 5/19 (26%)
C2H2 Zn finger 559..579 CDD:275370 5/17 (29%)
CG3281NP_650132.1 zf-AD 15..91 CDD:214871 15/80 (19%)
C2H2 Zn finger 205..226 CDD:275368 5/20 (25%)
C2H2 Zn finger 249..266 CDD:275368 5/16 (31%)
COG5048 <294..>391 CDD:227381 40/97 (41%)
C2H2 Zn finger 296..315 CDD:275368 7/19 (37%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..371 CDD:275368 7/19 (37%)
zf-H2C2_2 364..388 CDD:463886 11/23 (48%)
C2H2 Zn finger 379..399 CDD:275368 7/19 (37%)
zf-H2C2_2 391..416 CDD:463886 9/28 (32%)
C2H2 Zn finger 407..424 CDD:275368 8/20 (40%)

Return to query results.
Submit another query.