DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and CG18476

DIOPT Version :9

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster


Alignment Length:366 Identity:99/366 - (27%)
Similarity:150/366 - (40%) Gaps:81/366 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 EVSIQETFEDAFDEENDNNNTDS-----EREDSDQWTVGSTEDQDEPWIPGGGGRQTVGGNNQSL 240
            |:.:..:...::|..::.:.|:.     :.|||:      |||:.:|.:          |:....
  Fly   588 ELKLSLSLHQSYDSPHNYSITNESGFELQLEDSE------TEDEMQPGV----------GSRPVY 636

  Fly   241 LCTECGVSYSTQ-------------------------KALARHVAKHKEQG---DTQKPHLCDFC 277
            :|..|.|....:                         |.:::.:..|..||   .|:|.|.|..|
  Fly   637 ICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMDHHRQGQCSSTEKKHACGKC 701

  Fly   278 GRGFRTNAQLTTH-RRRHTGERPFKCPLCPKAYTHGPTLKSHMH-THDEEKGH--------KCPQ 332
            ...|.....|..| ..:|:           |:....||...|.. |.|.||..        :||.
  Fly   702 SYKFMWPENLEQHILLQHS-----------KSSVSNPTGDRHTQGTGDLEKDATEDGIPLLQCPH 755

  Fly   333 CDKTFYTRGNLRAHIQ--RHTGERPYK-------CPDCPQTFAKNSGLKLHSRLHKEERPFKCEL 388
            ||:|:..:..|..||:  ...|:|..|       |..|.......:.|..|.|.|..|:||||:|
  Fly   756 CDRTYQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDL 820

  Fly   389 CGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNH 453
            |...|.::..|.:|.|:|.|::.|.|..|.|.|.....:.:|..||||:||.||..|.:::....
  Fly   821 CEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAK 885

  Fly   454 HLKSHLRIHTGEKPYKCDQCGKGFSANQSLMKHTLW--HVD 492
            .||.||:.||||.|:.|..||:.|..:.:|.||.|.  |.|
  Fly   886 DLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHRLMRRHFD 926

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 21..95 CDD:285071
C2H2 Zn finger 242..262 CDD:275368 4/44 (9%)
C2H2 Zn finger 274..294 CDD:275368 5/20 (25%)
zf-H2C2_2 287..311 CDD:290200 4/24 (17%)
C2H2 Zn finger 302..322 CDD:275368 4/20 (20%)
C2H2 Zn finger 330..350 CDD:275368 8/21 (38%)
zf-H2C2_2 342..366 CDD:290200 8/32 (25%)
C2H2 Zn finger 358..378 CDD:275368 5/19 (26%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
COG5048 <395..583 CDD:227381 39/100 (39%)
zf-C2H2 412..434 CDD:278523 6/21 (29%)
C2H2 Zn finger 414..434 CDD:275368 5/19 (26%)
zf-H2C2_2 426..451 CDD:290200 10/24 (42%)
C2H2 Zn finger 442..462 CDD:275368 6/19 (32%)
zf-H2C2_2 454..478 CDD:290200 12/23 (52%)
C2H2 Zn finger 470..486 CDD:275368 5/15 (33%)
C2H2 Zn finger 500..520 CDD:275368
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
CG18476NP_731615.1 zf-AD 6..84 CDD:285071
C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 490..511 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 638..659 CDD:275368 3/20 (15%)
C2H2 Zn finger 668..690 CDD:275368 4/21 (19%)
C2H2 Zn finger 698..715 CDD:275368 4/16 (25%)
C2H2 Zn finger 753..774 CDD:275368 8/20 (40%)
C2H2 Zn finger 790..810 CDD:275368 5/19 (26%)
zf-H2C2_2 802..825 CDD:290200 11/22 (50%)
COG5048 814..>886 CDD:227381 27/71 (38%)
C2H2 Zn finger 818..838 CDD:275368 7/19 (37%)
zf-H2C2_2 830..855 CDD:290200 10/24 (42%)
C2H2 Zn finger 846..866 CDD:275368 5/19 (26%)
zf-H2C2_2 859..883 CDD:290200 10/23 (43%)
C2H2 Zn finger 874..894 CDD:275368 6/19 (32%)
C2H2 Zn finger 902..924 CDD:275368 8/21 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 121 1.000 Inparanoid score I1302
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D42822at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.060

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