DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and CG6808

DIOPT Version :9

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster


Alignment Length:441 Identity:111/441 - (25%)
Similarity:173/441 - (39%) Gaps:97/441 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MERSVDASMGKNCRACAEH--SSILVDLFSKEISDPPIWEMLNSILPEICRVKRDEMPQKICPTC 71
            ||.|:..||   ||.|.:.  .|.|..||........|.....|:.|:      |.:|.:||..|
  Fly     1 MEISIKWSM---CRTCRKKGTQSTLQSLFESNAHKLLISYAGTSVKPD------DGLPDQICTVC 56

  Fly    72 LVAAQNAFHFRHKCEQSFQFFSQLLQLDKSNSNLSRSHCRRGTMNPLIPFEIVGCEDPLDTNVTK 136
            |:..:....|...|:||......|:               |.|::....||.:..:|.|:   .|
  Fly    57 LMQLEEVDRFLSACKQSDAHLRSLV---------------RQTLSSASAFETLEDKDQLE---QK 103

  Fly   137 LDANRPDVKTDI--DEPTDGK-------ATNGQESEPLQE-----VFEITMNDIKTEDEVSIQET 187
            ..|.:.::...:  :.|.:.|       .|...|..|:.:     ||::.:|   .|:|      
  Fly   104 KRARKQNISGRLIEENPINFKTQENALETTKDDEILPINKFSSDFVFDLNVN---AENE------ 159

  Fly   188 FEDAFDEENDNNNTDSEREDSDQWTVGSTEDQDEPWIPGGGGRQTVGGNNQSLLCTECGVSYSTQ 252
             :|...|:...::.|.:||.||| ....|..|:.            .....|:  .|....|...
  Fly   160 -KDIHQEDYTISDMDLDREISDQ-NYSETYSQES------------SAATDSI--QETSEDYHNL 208

  Fly   253 KALARHVAKHKEQGDTQKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKS 317
            :..|.:|.   :.|...:|.                          .::|.:|...|.....|.:
  Fly   209 EPSADYVI---DLGVACEPD--------------------------KYRCKICSNTYRCLSQLNA 244

  Fly   318 HMHTHDEEKGHKCPQCDKTFYTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGLKLHSRLHKEER 382
            |...|.:||.|:|..|.|||....||:.|::.||||:||:|..|.:.||.||..:.|.|||..||
  Fly   245 HSQVHRKEKDHQCEVCQKTFRAACNLKTHMRTHTGEKPYQCCYCSRRFADNSTHRKHERLHTNER 309

  Fly   383 PFKCELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRT 433
            |:.|.:|||.|..:.....|..:|:.::..||..|.|.|..|..:..|:::
  Fly   310 PYACNICGKTFSLSSSRNAHYYLHSSEKSHKCLMCKKEFRLKHQLTAHEKS 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 21..95 CDD:285071 20/75 (27%)
C2H2 Zn finger 242..262 CDD:275368 4/19 (21%)
C2H2 Zn finger 274..294 CDD:275368 0/19 (0%)
zf-H2C2_2 287..311 CDD:290200 3/23 (13%)
C2H2 Zn finger 302..322 CDD:275368 5/19 (26%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
zf-H2C2_2 342..366 CDD:290200 11/23 (48%)
C2H2 Zn finger 358..378 CDD:275368 8/19 (42%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)
COG5048 <395..583 CDD:227381 9/39 (23%)
zf-C2H2 412..434 CDD:278523 7/22 (32%)
C2H2 Zn finger 414..434 CDD:275368 6/20 (30%)
zf-H2C2_2 426..451 CDD:290200 1/8 (13%)
C2H2 Zn finger 442..462 CDD:275368
zf-H2C2_2 454..478 CDD:290200
C2H2 Zn finger 470..486 CDD:275368
C2H2 Zn finger 500..520 CDD:275368
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871 21/78 (27%)
C2H2 Zn finger 229..249 CDD:275368 5/19 (26%)
zf-C2H2 255..277 CDD:278523 9/21 (43%)
C2H2 Zn finger 257..277 CDD:275368 8/19 (42%)
zf-H2C2_2 269..293 CDD:290200 11/23 (48%)
C2H2 Zn finger 285..305 CDD:275368 8/19 (42%)
zf-H2C2_2 299..321 CDD:290200 11/21 (52%)
C2H2 Zn finger 313..333 CDD:275368 6/19 (32%)
C2H2 Zn finger 341..359 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440475
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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