DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Meics and kipf

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_649750.1 Gene:kipf / 40937 FlyBaseID:FBgn0014931 Length:434 Species:Drosophila melanogaster


Alignment Length:501 Identity:122/501 - (24%)
Similarity:195/501 - (38%) Gaps:134/501 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KN-CRACAEHSSILVDLFSKEISDPPIWEMLNSILPEICR-----VKR-DEMPQKICPTCLVAAQ 76
            || ||.|.:.:..|||:|: .:.||.:.|...|:...:.|     ||| |.:||.||.:|::|.|
  Fly     6 KNVCRTCMDETGTLVDIFA-NVRDPVLDEPEMSLSHILARCTERPVKRGDLLPQFICVSCVLAVQ 69

  Fly    77 NAFHFRHKCEQSFQFFSQLLQLDKSNSNLSRSHCRRGTMNPLIPFEIVGCEDPLDTNVTKLDANR 141
            |||.|:.:.|||:|.|.::|....:..|........|..|.:|                   ..:
  Fly    70 NAFRFKWQSEQSYQHFFRVLNQSGAPENQVHLAACNGDKNQII-------------------NQK 115

  Fly   142 PDVKTDIDEPTDGKATNGQESEPLQEVFEITMNDIKTEDEVSIQETFEDAFDEENDNNNTDSERE 206
            ..:|:|..:.|       |:....|          |.:|::|.::|.:....|.|.:...:|...
  Fly   116 MQLKSDRQQDT-------QQMTKTQ----------KPDDDLSQKQTLQAKLQEGNIDGPPESFTL 163

  Fly   207 DSDQWTVGSTEDQDEPWIPGGGGRQTVGGNNQSLLCTECGVSYSTQKALARHVAKHKEQGDTQKP 271
            ...:.|..:.|..|  .||....|.|      .::|                        |....
  Fly   164 HPRKRTCRTEEQAD--MIPKEATRST------KMIC------------------------DADGY 196

  Fly   272 HLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQCDKT 336
            :.|..|.:.|.:..||    |.|..:...:||.||:.|.....||.|:..|..:..|||..|.|.
  Fly   197 YNCPHCSKRFCSQTQL----RTHITDLCNRCPYCPRTYMQKSNLKRHLRNHLSKPAHKCFHCSKA 257

  Fly   337 FYTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGLKLHSRLHKEE-------------------- 381
            |..:.:|:.|::.|..:.|..|..|...|.::..|::|.|.||:.                    
  Fly   258 FMRKDHLKRHLRTHDSDGPLSCSQCSAVFIEHVQLEIHRREHKQRPGSSKSESTKDPDSDDSDQA 322

  Fly   382 ------------------------RPFKCELCGKGF----VQNQHLITHLRVHNGDRQFKCPDCD 418
                                    :|. |::|.|.|    ...:|::||.|.|:   ..||..|.
  Fly   323 QDLKPKWTKNTFNGTCSIPPMLKPKPI-CDICQKKFSSVYALKRHMLTHNRQHH---LKKCTYCS 383

  Fly   419 KSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSH-LRIHT 463
            :.|..:.::.:|:|.|.| ..|:||.|...|...::|:.| .|||:
  Fly   384 EEFKTEKHLKRHERGHMG-DLFRCEFCSLVFVDVNYLRKHKKRIHS 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262 33/81 (41%)
C2H2 Zn finger 242..262 CDD:275368 1/19 (5%)
C2H2 Zn finger 274..294 CDD:275368 6/19 (32%)
SFP1 <296..374 CDD:227516 23/77 (30%)
COG5048 <299..486 CDD:227381 55/214 (26%)
C2H2 Zn finger 302..322 CDD:275368 8/19 (42%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
C2H2 Zn finger 386..406 CDD:275368 8/23 (35%)
COG5048 <395..583 CDD:227381 23/70 (33%)
C2H2 Zn finger 414..434 CDD:275368 5/19 (26%)
C2H2 Zn finger 442..462 CDD:275368 7/20 (35%)
C2H2 Zn finger 470..486 CDD:275368
C2H2 Zn finger 500..520 CDD:275368
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
kipfNP_649750.1 zf-AD 8..75 CDD:462262 26/67 (39%)
COG5048 220..>284 CDD:227381 21/63 (33%)
C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
C2H2 Zn finger 350..370 CDD:275368 5/19 (26%)
C2H2 Zn finger 379..399 CDD:275368 5/19 (26%)
C2H2 Zn finger 406..427 CDD:275368 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.