DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and CG17359

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster


Alignment Length:140 Identity:32/140 - (22%)
Similarity:55/140 - (39%) Gaps:35/140 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 KKVLIKIADNFFKDHLPWKFPRLTLTDGTTIYIKRSY-----FVGFLVQET----------ANVS 327
            ||.::.:...|...:    |..|...:|..:|::..:     ....::|.:          |::|
  Fly    76 KKQILSLGAGFDT
TY----FQLLDEGNGPNLYVELDFKEVTSKKAAVIQNSSQLRDKLGANASIS 136

  Fly   328 LD------DH------DLRDSPLVTNYVCFTTPINDLLKF---HTLLISLSHKVS-SKVHHSSLF 376
            :|      ||      ||||.|.:.:.:.|......|..|   ..:||.|....| :.|:.||..
  Fly   137 IDEGQVLSDHYKLLPVDLRDIPKLRDVISFADMDLSLPTFIIAECVLIYLDPDSSRAIVNWSSKT 201

  Fly   377 FATMYLFEFE 386
            |:|...|.:|
  Fly   202 FSTAVFFLYE 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262
C2H2 Zn finger 242..262 CDD:275368
C2H2 Zn finger 274..294 CDD:275368 3/15 (20%)
SFP1 <296..374 CDD:227516 23/108 (21%)
COG5048 <299..486 CDD:227381 28/119 (24%)
C2H2 Zn finger 302..322 CDD:275368 2/24 (8%)
C2H2 Zn finger 330..350 CDD:275368 8/25 (32%)
C2H2 Zn finger 358..378 CDD:275368 7/20 (35%)
C2H2 Zn finger 386..406 CDD:275368 1/1 (100%)
COG5048 <395..583 CDD:227381
C2H2 Zn finger 414..434 CDD:275368
C2H2 Zn finger 442..462 CDD:275368
C2H2 Zn finger 470..486 CDD:275368
C2H2 Zn finger 500..520 CDD:275368
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
CG17359NP_648679.1 zf-AD 6..88 CDD:462262 3/11 (27%)
SFP1 <131..317 CDD:227516 24/81 (30%)
C2H2 Zn finger 217..237 CDD:275368
zf-H2C2_2 229..254 CDD:463886
C2H2 Zn finger 245..265 CDD:275368
C2H2 Zn finger 273..293 CDD:275368
C2H2 Zn finger 301..321 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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