DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and D19A

DIOPT Version :9

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_477304.1 Gene:D19A / 38718 FlyBaseID:FBgn0022935 Length:845 Species:Drosophila melanogaster


Alignment Length:762 Identity:160/762 - (20%)
Similarity:249/762 - (32%) Gaps:248/762 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 CRACAEH--SSILVDLF-----SKEISDPPIWEMLNSILPEICRVKRDEMPQKICPTCLVAAQNA 78
            ||.|..|  :....||:     ||::.      ...|:..|    :.|..|:.:|..|.......
  Fly    13 CRICLNHLQNDAAYDLYLVPGLSKKLC------FCTSLSVE----QNDGFPKNLCTLCYTKLNEL 67

  Fly    79 FHFRHKCEQSFQFFSQLLQLDKSNSNLSRSHCRRGTMNPLIPFEIVGCE-------DPLDTNVTK 136
            ..|:.:|..|.|.|..|:.     ||:..........:|.:..:....|       |||..:..:
  Fly    68 HDFQKQCVDSVQKFQDLVA-----SNVFACQSSFDVFDPNVAVQDYPAEEEDHVNYDPLLNHKME 127

  Fly   137 LDANRPDVKTDIDEPTDGKATNGQESEPLQEVFEITMNDIKTEDE----VSIQETFEDAFDEEND 197
            |..|..||...: |..|      :|:|.:::       :.|.|::    ||::...:|:..|..:
  Fly   128 LIENEEDVFKML-EHVD------KEAEEVEK-------EAKVEEDDGGNVSVKMFDDDSSIESGN 178

  Fly   198 NNNTDSEREDSDQWTVGSTEDQDEPWIPGGGGRQTVGGNNQSL---------------------- 240
            :|:.|.:.|.       ::.|.|.|......|..|..|..|..                      
  Fly   179 DNDHDLDFEP-------NSSDDDIPLAQRMRGPATGSGPQQDRFSNLDKPKPRPRGRPKKIKPPP 236

  Fly   241 -----LCTECGVSYSTQKALARHVAKHKEQGDTQKPHL-----CDFCGRGFRTNAQLTTHRRRHT 295
                 |......|..::...:|.....:::...::.||     |..|.:.|:...:...|.:.|.
  Fly   237 PEEEELSDSSSESDDSEDGTSRGDKPKRKRIPIEERHLHRIIDCHICHQKFKKAIRYEEHMKYHN 301

  Fly   296 GERPFKCPL--CPKAYTHGPTLKSHM-HTHDE--------------------------EKGH--- 328
            ...||:|.:  |.|.:|....|:.|: |.|.|                          :|.|   
  Fly   302 DLLPFQCKVETCKKGFTTANGLRIHIDHAHTELSEVHACIAEGCGKTFPRVRLLTFHMKKVHGIT 366

  Fly   329 ---------KCPQCDKTFYTRGNLRAHIQRHTGER-PYKCPDCPQTFAKNSGLKLHSRLHKEERP 383
                     .|.:||..|.....|:.|:.:||||. ||.|..|.:.|..||.|:.|...|...:.
  Fly   367 KAAAPLRDFPCTECDTVFRCPTALKKHMYKHTGEELPYPCNICGKRFVINSALRDHLMRHAGIKN 431

  Fly   384 FKCELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQR-THSGIKPFKCEECGQ 447
            ..|..||.|....|....|:..|..:::|||..||.:...|..:..|.: .|...|.|.|:.||:
  Fly   432 HVCPYCGVGKTTRQEWNAHILTHTKEKKFKCRQCDHASHNKQALSNHVKVVHEKRKDFACQYCGK 496

  Fly   448 AFSHNHHLKSHLRIHTGEKPYKCDQCGKGFSANQSLMKHTLWH---------------------- 490
            .|..:|..|.|.|.|||||..:|..|||.|...:||.||...|                      
  Fly   497 TFGKSHACKVHERSHTGEKCCECKICGKIFLCEKSLTKHLKTHEKRDLPPAEPLRQQLNIPMPGQ 561

  Fly   491 --------------------VDNNDRPFK------------------------------------ 499
                                :|.|..|.:                                    
  Fly   562 MSVPMPGQMPMQMQTDGLVPMDPNQMPSEDMLKACGGGTAAVPPKPKNSRRVQRVDISQLAGTAV 626

  Fly   500 -------------------------CSQCPKAYDTQQSLRGHEKTHKNPDEPKTLHQ------CP 533
                                     |..|.:.::.    .|:.|.|.     |.:|:      |.
  Fly   627 NPIPSVSVPSWSPQVNFTKKEGQHICPGCGRGFNN----IGNMKLHY-----KIIHEKVKDFACR 682

  Fly   534 HCDVRFALKKTLDKHITSHK-IRPHPCPQCPEGFFSQKSLKKHLRLH 579
            .|..||:..:.|..|...|. .:|..|..|.:.|..:.:||||::.|
  Fly   683 FCPKRFSKAQILRHHEWIHTGEKPFECKICGKHFRQETALKKHIKTH 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 21..95 CDD:285071 19/80 (24%)
C2H2 Zn finger 242..262 CDD:275368 2/19 (11%)
C2H2 Zn finger 274..294 CDD:275368 4/19 (21%)
zf-H2C2_2 287..311 CDD:290200 7/25 (28%)
C2H2 Zn finger 302..322 CDD:275368 7/22 (32%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
zf-H2C2_2 342..366 CDD:290200 10/24 (42%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)
COG5048 <395..583 CDD:227381 62/296 (21%)
zf-C2H2 412..434 CDD:278523 7/22 (32%)
C2H2 Zn finger 414..434 CDD:275368 5/20 (25%)
zf-H2C2_2 426..451 CDD:290200 8/25 (32%)
C2H2 Zn finger 442..462 CDD:275368 8/19 (42%)
zf-H2C2_2 454..478 CDD:290200 12/23 (52%)
C2H2 Zn finger 470..486 CDD:275368 7/15 (47%)
C2H2 Zn finger 500..520 CDD:275368 4/19 (21%)
C2H2 Zn finger 532..552 CDD:275370 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275370 7/19 (37%)
D19ANP_477304.1 zf-AD 12..83 CDD:214871 19/79 (24%)
C2H2 Zn finger 343..362 CDD:275368 0/18 (0%)
C2H2 Zn finger 377..397 CDD:275368 6/19 (32%)
zf-H2C2_2 389..414 CDD:290200 10/24 (42%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
C2H2 Zn finger 434..454 CDD:275368 6/19 (32%)
C2H2 Zn finger 462..483 CDD:275368 5/20 (25%)
C2H2 Zn finger 491..511 CDD:275368 8/19 (42%)
C2H2 Zn finger 519..539 CDD:275368 9/19 (47%)
C2H2 Zn finger 652..673 CDD:275368 6/29 (21%)
C2H2 Zn finger 681..701 CDD:275368 6/19 (32%)
zf-H2C2_2 694..718 CDD:290200 7/23 (30%)
C2H2 Zn finger 709..729 CDD:275368 7/19 (37%)
tolA_full 724..>814 CDD:274303 3/6 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I1382
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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