DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and cg

DIOPT Version :9

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster


Alignment Length:410 Identity:119/410 - (29%)
Similarity:174/410 - (42%) Gaps:95/410 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 TVGGNNQSLLCTECGVSYSTQKALARHVAKHKEQGDT---------------------------- 268
            :|||....|.....|:|...||.:.........||:.                            
  Fly   219 SVGGATTLLGDILPGISVQVQKVIQGLEDNEDSQGEAPNLKLEPGTLELSPKTELQESMHFSETD 283

  Fly   269 -----QKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGH 328
                 ::|:.||.||:.|.....||||.|.||||||                            |
  Fly   284 ATIKKERPYSCDECGKSFLLKHHLTTHARVHTGERP----------------------------H 320

  Fly   329 KCPQCDKTFYTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGF 393
            .|..|.|:|..:..|..|:..|:.||||:|.:|.::|.....|..|||:|..||||.|:.||:.|
  Fly   321 ICTHCGKSFAHKHCLNTHLLLHSTERPYQCQECKKSFTLKHHLLTHSRVHSRERPFVCQECGRAF 385

  Fly   394 VQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSH 458
            ...:||:||.:.|.|:|.:.|.:|.:||.::::::.|.|.|..:.||.|.|||.:|.....|.:|
  Fly   386 PLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCAECGASFPRKFQLVNH 450

  Fly   459 LRIHTGEKPYKCDQCGKGFSANQSLMKHTLWHVDNNDRPFKCSQCPKAYDTQQSLRGHEKTHKNP 523
            .||| |:.|:.|..|||.|...::|:.| :..|...::...|..|.:.:.|:..|..|.:|..|.
  Fly   451 GRIH-GKIPHSCTVCGKEFLQKRTLVSH-MRRVHTGEQAHPCVSCGEGFLTKAELHQHVRTAHNG 513

  Fly   524 DEPKT----------LHQCPHCDVRFALKKTLDKHIT------------------SHKIRPH-PC 559
            ..|.|          |.|..|   ..|.::|..:.||                  :...||. .|
  Fly   514 VNPNTSSATIIANQQLQQAHH---HQAGQQTHPQTITVVSNPGNSTLLTVSTTDANGVARPQFVC 575

  Fly   560 PQCPEGFFSQKSLKKHLRLH 579
            .:|...|.|:::|..|||||
  Fly   576 RECGSAFNSREALALHLRLH 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 21..95 CDD:285071
C2H2 Zn finger 242..262 CDD:275368 4/19 (21%)
C2H2 Zn finger 274..294 CDD:275368 10/19 (53%)
zf-H2C2_2 287..311 CDD:290200 11/23 (48%)
C2H2 Zn finger 302..322 CDD:275368 0/19 (0%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
zf-H2C2_2 342..366 CDD:290200 9/23 (39%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
COG5048 <395..583 CDD:227381 64/214 (30%)
zf-C2H2 412..434 CDD:278523 6/21 (29%)
C2H2 Zn finger 414..434 CDD:275368 6/19 (32%)
zf-H2C2_2 426..451 CDD:290200 10/24 (42%)
C2H2 Zn finger 442..462 CDD:275368 8/19 (42%)
zf-H2C2_2 454..478 CDD:290200 11/23 (48%)
C2H2 Zn finger 470..486 CDD:275368 6/15 (40%)
C2H2 Zn finger 500..520 CDD:275368 5/19 (26%)
C2H2 Zn finger 532..552 CDD:275370 5/37 (14%)
C2H2 Zn finger 559..579 CDD:275370 8/19 (42%)
cgNP_001097306.2 COG5048 287..>371 CDD:227381 36/111 (32%)
C2H2 Zn finger 294..314 CDD:275368 10/19 (53%)
zf-H2C2_2 306..331 CDD:290200 16/52 (31%)
C2H2 Zn finger 322..342 CDD:275368 6/19 (32%)
C2H2 Zn finger 350..370 CDD:275368 7/19 (37%)
zf-H2C2_2 362..385 CDD:290200 12/22 (55%)
C2H2 Zn finger 378..398 CDD:275368 8/19 (42%)
zf-H2C2_2 390..415 CDD:290200 11/24 (46%)
C2H2 Zn finger 406..426 CDD:275368 6/19 (32%)
SIR2 <425..>465 CDD:294129 16/40 (40%)
C2H2 Zn finger 434..454 CDD:275368 8/19 (42%)
C2H2 Zn finger 461..482 CDD:275368 7/21 (33%)
C2H2 Zn finger 490..509 CDD:275368 5/18 (28%)
lambda-1 491..>603 CDD:212564 27/108 (25%)
C2H2 Zn finger 575..595 CDD:275368 8/19 (42%)
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440470
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D42822at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.940

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