DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and Zkscan7

DIOPT Version :9

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_017451263.1 Gene:Zkscan7 / 363170 RGDID:1305242 Length:833 Species:Rattus norvegicus


Alignment Length:636 Identity:172/636 - (27%)
Similarity:256/636 - (40%) Gaps:173/636 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EHSSILVDLFSKEISD-----PPIWEMLNSILPEICRVKRDEMPQKICPTCLVAAQN-------- 77
            |.:..:|:.|.:.:|:     ||:.|. :..|.::..::..|....:...|..|..:        
  Rat   284 EEAVAVVEDFQRHLSESGEVSPPVQEQ-DVHLKKMVALRATEQSPTLTSGCCSAPDDLLNPPCDP 347

  Fly    78 -AFHFRH----KCEQSFQFFSQLLQLDKSNSNLSRSHCRRGTMNPLIPFEIVG------CEDPLD 131
             |.||..    |.......:|....:.|.:.:|..|      ...|....:|.      ||||| 
  Rat   348 GAHHFPSGHFGKNRMGSSEYSPKQGISKGSHSLDTS------SGGLFGVALVEPESGDICEDPL- 405

  Fly   132 TNVTKLDANRPDVKTDIDE-PTDGKATNGQESEPLQEVFEITMNDIKTEDEVSIQETFEDAFDEE 195
                          ..::. |:|    .|.|                          .|..|.|:
  Rat   406 --------------AQVEGCPSD----EGSE--------------------------LESDFLEK 426

  Fly   196 NDNNNTDSER-EDSDQWTVGSTEDQDEPWIPGGGGRQTVGGNNQSLLCTECGVSYSTQKALARHV 259
            ||..|:..:| |||..    ..|..:.|..|....|:....|  |..|.|||..::.    :.|:
  Rat   427 NDEKNSTKDRIEDSKD----VRERPESPSSPAEHQREAKRQN--SYQCDECGKIFNR----SSHL 481

  Fly   260 AKHKEQGDTQKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDE 324
            ..|:.....::|..|:.||:.|...:||..|.|.||.|:|::|....|.|.|...|..|...|:.
  Rat   482 LGHRRIHTGERPSECNECGKTFLQTSQLIVHLRTHTQEKPYECQESGKTYCHSSRLIQHQRLHNG 546

  Fly   325 EKGHK----------------------------------------------------CPQCDKTF 337
            ||.:|                                                    |.:|.|.|
  Rat   547 EKPYKGNECVKASIQSSQLIDHKGAHAAEKPNESEEAFIWSKSLQHQVLHTSKKPYECNECGKAF 611

  Fly   338 YTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGFVQNQHLITH 402
            .:..||..|.:.||||:||:|.:|.:.|:::..|..|..||..|:|:||..|||.|.||..||.|
  Rat   612 CSNRNLTDHQRIHTGEKPYECIECGKAFSRSKCLTRHQSLHTGEKPYKCSECGKAFSQNSQLIDH 676

  Fly   403 LRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSHLRIHTGEKP 467
            .|:|.|::.|:|.:|.|.|.....:::|||.|:|.||:||.|||::|:.|.||..|.||||||||
  Rat   677 ERIHTGEKPFECSECGKKFSLSKCLIRHQRLHTGEKPYKCSECGKSFNQNSHLIIHQRIHTGEKP 741

  Fly   468 YKCDQCGKGFSANQSLMKHTLWHVDNNDRPFKCSQCPKAYDTQQSLRGHEKTHKNPDEPKTLHQC 532
            |.|::|||.||.:.|||.|...|  ..::|:||..|.|::.....|..|::.|            
  Rat   742 YGCNECGKVFSYSSSLMVHQRTH--TGEKPYKCKDCMKSFGDSSQLIVHQRVH------------ 792

  Fly   533 PHCDVRFALKKTLDKHITSHKIRPHPCPQCPEGFFSQKSLKKHLRLHNLKK 583
                             |..|  |:.|.:|.:.|..:.:...|.|.||::|
  Rat   793 -----------------TGEK--PYECIECGKAFSQRSTFNHHQRTHNVEK 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 21..95 CDD:285071 16/86 (19%)
C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 274..294 CDD:275368 8/19 (42%)
zf-H2C2_2 287..311 CDD:290200 10/23 (43%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
zf-H2C2_2 342..366 CDD:290200 11/23 (48%)
C2H2 Zn finger 358..378 CDD:275368 5/19 (26%)
C2H2 Zn finger 386..406 CDD:275368 11/19 (58%)
COG5048 <395..583 CDD:227381 68/187 (36%)
zf-C2H2 412..434 CDD:278523 8/21 (38%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
zf-H2C2_2 426..451 CDD:290200 13/24 (54%)
C2H2 Zn finger 442..462 CDD:275368 10/19 (53%)
zf-H2C2_2 454..478 CDD:290200 16/23 (70%)
C2H2 Zn finger 470..486 CDD:275368 9/15 (60%)
C2H2 Zn finger 500..520 CDD:275368 5/19 (26%)
C2H2 Zn finger 532..552 CDD:275370 1/19 (5%)
C2H2 Zn finger 559..579 CDD:275370 5/19 (26%)
Zkscan7XP_017451263.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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