DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and CG17328

DIOPT Version :9

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster


Alignment Length:604 Identity:140/604 - (23%)
Similarity:203/604 - (33%) Gaps:229/604 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VDASMGKNCRACAEHSSILVDLFSKEISDPPIWEMLNSILPEIC---RV-KRDEMPQKICPTCLV 73
            :|.::.|.||.|.|....:..::|.:.:      |:.|::...|   || |.|.:|..||..|:.
  Fly     1 MDYNIHKICRVCLEELHPVTSIYSTDFA------MMPSVMLMQCAKIRVFKTDGLPSVICNNCIY 59

  Fly    74 AAQNAFHFRHKCEQSFQFFSQLLQLDKSNSNLSRSHCRRGTMNPLIPFEIVGCEDPLDTNVTKLD 138
            ....||||:.:||.|.....|.|.:                                      |:
  Fly    60 RLGVAFHFKQECENSDLRLRQYLGI--------------------------------------LE 86

  Fly   139 ANRPDVKTDIDEPTDGKATNGQESEPLQEVFEITMNDIKTEDEVSIQETFEDAFDEENDNNNTDS 203
            :.|.|..|:.|                                          |.|:......||
  Fly    87 SWRQDAATNTD------------------------------------------FVEKPLLPQRDS 109

  Fly   204 EREDSDQWTVGSTEDQDEPWIPGGGGRQTVGGNNQSLLCTECGVSYSTQKALARHVAKHKEQGDT 268
                          |::||                        |.....|..:|:..|..|:   
  Fly   110 --------------DEEEP------------------------VDAKVSKRRSRYQRKPPEE--- 133

  Fly   269 QKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQC 333
                                 |::|  |.:|  .|..|                     |.|.:|
  Fly   134 ---------------------HKKR--GPKP--VPKMP---------------------HTCYEC 152

  Fly   334 DKTFYTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGFVQNQH 398
            .|:|.....|..||:.||||:||:|..|.|.||:...||:|.|.|..::||:||:|.|.|....:
  Fly   153 HKSFKCIAQLTQHIRTHTGEKPYQCSFCIQRFAQKYNLKVHERTHTGDKPFQCEICSKQFSALGN 217

  Fly   399 LITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSH-LRIH 462
            ...|.::|.|.|...|..|.|.|:...::.||..||:|||...|:.||:|||....:::| |::|
  Fly   218 FQAHQKIHLGVRDQVCSLCQKGFYTAGDLSKHMITHTGIKNHHCDVCGKAFSRRRDMRTHKLKLH 282

  Fly   463 TGEKPYKCDQCGKGFSANQSLMKHTLWHVDNND----------------RPFKCSQCPKAYDTQQ 511
            ..|.           |.|..:       ||::|                ..|||..|.||:||..
  Fly   283 PLES-----------STNHDI-------VDDDDDEAIDTDPVGLDTLDHAHFKCPDCDKAFDTAD 329

  Fly   512 SLRGHEKTHKN---------PDEPKTLHQCPHCDVRFAL-----KKTLDKHITSHKIR-PHPCPQ 561
            ||..|.:||..         |..|...|...| |....|     ...:.....:|.:. |.|.|.
  Fly   330 SLSLHFRTHAANNNLLNLPLPPAPPMSHHYHH-DALHHLGPPNPATQMGMAAMAHMLAPPPPPPP 393

  Fly   562 CP-EGFFSQKSLKKHLRLH 579
            .| ||.::........|||
  Fly   394 TPSEGRYTMLHHTAAQRLH 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 21..95 CDD:285071 23/77 (30%)
C2H2 Zn finger 242..262 CDD:275368 3/19 (16%)
C2H2 Zn finger 274..294 CDD:275368 1/19 (5%)
zf-H2C2_2 287..311 CDD:290200 6/23 (26%)
C2H2 Zn finger 302..322 CDD:275368 2/19 (11%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
zf-H2C2_2 342..366 CDD:290200 12/23 (52%)
C2H2 Zn finger 358..378 CDD:275368 9/19 (47%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)
COG5048 <395..583 CDD:227381 59/218 (27%)
zf-C2H2 412..434 CDD:278523 6/21 (29%)
C2H2 Zn finger 414..434 CDD:275368 6/19 (32%)
zf-H2C2_2 426..451 CDD:290200 12/24 (50%)
C2H2 Zn finger 442..462 CDD:275368 8/20 (40%)
zf-H2C2_2 454..478 CDD:290200 4/24 (17%)
C2H2 Zn finger 470..486 CDD:275368 2/15 (13%)
C2H2 Zn finger 500..520 CDD:275368 9/19 (47%)
C2H2 Zn finger 532..552 CDD:275370 3/24 (13%)
C2H2 Zn finger 559..579 CDD:275370 5/20 (25%)
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 23/77 (30%)
COG5048 146..>211 CDD:227381 30/85 (35%)
C2H2 Zn finger 149..169 CDD:275368 7/19 (37%)
C2H2 Zn finger 177..197 CDD:275368 9/19 (47%)
zf-H2C2_2 189..213 CDD:404364 11/23 (48%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
zf-H2C2_2 245..270 CDD:404364 12/24 (50%)
C2H2 Zn finger 261..282 CDD:275368 8/20 (40%)
C2H2 Zn finger 318..338 CDD:275368 9/19 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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