DRSC/TRiP Functional Genomics Resources

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Protein Alignment Meics and CG15269

DIOPT Version :10

Sequence 1:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster


Alignment Length:624 Identity:162/624 - (25%)
Similarity:240/624 - (38%) Gaps:135/624 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SVDASMGKNCRACAEHSSILVDLFSKEISDPPIWEMLNSILPEICRVKRDEMPQ----------- 65
            |:...:||..::..:.|:.::|| ||..|        |||          ..||           
  Fly    39 SISKILGKERKSAQDTSTNILDL-SKSSS--------NSI----------RSPQALGGLAIPSTP 84

  Fly    66 ------KICPTCLVAAQNAFHFRHKCEQSFQFFSQLL--------------------QLDKSNSN 104
                  .:.|..|||..||..|      ..|||..||                    |..:...:
  Fly    85 YASGAYSMLPPDLVAMANATKF------YAQFFPHLLPAYAAAAAAAGLSTPPTSPYQTHQHQQH 143

  Fly   105 LSRSHCR-------RGTMNPLIPFEIVGCEDPLDTNVTKLDA-NRPDVKTDIDE----PTDGKAT 157
            |.....|       .|::.|..|.:  ..:.||..  ||..| .|||....:|.    .|.|...
  Fly   144 LPNQQKRFFAPYVINGSVPPPPPLQ--QQQQPLIR--TKSTACTRPDCPECLDYYQRLQTGGYKQ 204

  Fly   158 NGQESEPLQEVFEITMNDIKTEDEVSIQETFEDAFDEENDNNNTDSEREDSDQWTVGSTEDQDEP 222
            ......|.......:...|:...::.:..|...|....:....|:..........||..     |
  Fly   205 TAPLISPAASSVSSSTGSIRPVRDLIMSATGGAASTNISLTTVTNLSLNSVQATAVGMM-----P 264

  Fly   223 WIPGGGGRQTVGGNNQSLLCTECGV-SYSTQKALARHVAKHKEQGDTQKPHLCDFCGRGFRTNAQ 286
            .:.||.....||.|:.::    .|: .|:...|             .:..:.|..|.:.|..:..
  Fly   265 KMTGGLITTAVGSNSGAI----GGIGGYNATSA-------------EEISYKCRICEKVFGCSET 312

  Fly   287 LTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTH--DEEKGHKCPQCDKTFYTRGNLRAHIQR 349
            |..|.:.|...| ::|..|.|.::.....|.|:..|  .:|...:||:|.|||..:|.|.:|::.
  Fly   313 LQAHEKTHKSPR-YECADCGKGFSQLRNYKYHLSVHRGTKEFAAECPECGKTFNDKGYLSSHLKI 376

  Fly   350 HTGERPYKCPDCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKC 414
            |...:.|:||.||::|.:.....:|.|:|...:|.||..|||.|.:...|..|:|.|:|::.::|
  Fly   377 HRNRKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCNECGKRFSRKMLLKQHMRTHSGEKPYQC 441

  Fly   415 PDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKC--DQCGKGF 477
            ..|.|||.::|||..|.|.|||||||.|..|.:||:..||||:||..|||.|||.|  ..|.:.|
  Fly   442 SVCGKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHHLKTHLNYHTGCKPYVCPHPNCNQAF 506

  Fly   478 SANQSLMKHTLWHVDNNDRPFKCSQCPKAYD----TQQSLRGHEKTHKNPDEPKTLHQCPHCDVR 538
            :.:.::..|..          ||...|  .|    |..:|....|....|  |.||        .
  Fly   507 TQSSNMRTHAK----------KCQYRP--LDGLTVTSSALPVPGKQQTGP--PPTL--------A 549

  Fly   539 FALKKTLDKHITSHKIRPHPCPQCPEGFFSQKSLKKHLR 577
            .|:.:|.........:.|...|..|.   ||::|..:||
  Fly   550 MAMAQTFQMPPPPGVLTPGSGPSQPP---SQQTLLSNLR 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MeicsNP_524062.1 zf-AD 20..95 CDD:462262 21/91 (23%)
C2H2 Zn finger 242..262 CDD:275368 3/20 (15%)
C2H2 Zn finger 274..294 CDD:275368 5/19 (26%)
SFP1 <296..374 CDD:227516 24/79 (30%)
COG5048 <299..486 CDD:227381 74/190 (39%)
C2H2 Zn finger 302..322 CDD:275368 5/19 (26%)
C2H2 Zn finger 330..350 CDD:275368 9/19 (47%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
COG5048 <395..583 CDD:227381 63/189 (33%)
C2H2 Zn finger 414..434 CDD:275368 10/19 (53%)
C2H2 Zn finger 442..462 CDD:275368 10/19 (53%)
C2H2 Zn finger 470..486 CDD:275368 3/17 (18%)
C2H2 Zn finger 500..520 CDD:275368 6/23 (26%)
C2H2 Zn finger 532..552 CDD:275370 2/19 (11%)
C2H2 Zn finger 559..579 CDD:275370 7/19 (37%)
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 5/19 (26%)
C2H2 Zn finger 327..347 CDD:275368 5/19 (26%)
C2H2 Zn finger 357..377 CDD:275368 9/19 (47%)
COG5048 <370..515 CDD:227381 60/144 (42%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
C2H2 Zn finger 413..433 CDD:275368 8/19 (42%)
C2H2 Zn finger 441..461 CDD:275368 10/19 (53%)
C2H2 Zn finger 469..489 CDD:275368 10/19 (53%)
C2H2 Zn finger 497..515 CDD:275368 3/17 (18%)

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